Vespula pensylvanica (western yellowjacket): 122637421
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Entry
122637421 CDS
T07720
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03440
Homologous recombination
vps03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122637421
03450 Non-homologous end-joining
122637421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vps03032
]
122637421
03400 DNA repair and recombination proteins [BR:
vps03400
]
122637421
DNA replication proteins [BR:
vps03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
122637421
DNA repair and recombination proteins [BR:
vps03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
122637421
BRCA1-C complex
122637421
NHEJ (non-homologous end-joining)
MRX complex
122637421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_21
Rad50_zn_hook
SbcC_Walker_B
AAA_15
SMC_N
AAA_29
AAA_5
AAA_16
AAA_13
ABC_tran
AAA_22
EF_assoc_1
Motif
Other DBs
NCBI-GeneID:
122637421
NCBI-ProteinID:
XP_043685442
LinkDB
All DBs
Position
2:4372856..4379271
Genome browser
AA seq
1369 aa
AA seq
DB search
MSRIRQLSICGVRNFDEQDQPRIRFTRPLTLILGPNGTGKTTLIESLKFATTGDFPPGSD
RGKAFIHDKHTSGSRVVKGFVKAEFVNANGCSYTICRTIECLHSGTTSRFKTVDSTLSRR
EKGTTKAISVTNRCIDINAEVISAMGVSKSILNYVIFCHQEEFSWPLDDGKKLKEKFDEI
FESVRFNKALENFLKCIKNMEQGLRVFKVQKDALKNVVSEVEDKEKKRQNARDRLEDTTN
EITTINEELEPIMEKIREIEKMDAQHKTLVAEKDKKQLEYDINKQQIESLQENIQVFEGS
ITELTNQLEQYDSNLLKKASEITEVEKQLQQIASSEVKIINIITEKRISVGTLKQKMQDQ
EKKIVNRNKTLNNMLSKWNMETLVDKNTSDIEIAALVKNLDNKIENLKHEAEVKRRKRHE
KEEELQKEIDVLRSERSKIESEMNIKDNEVTETRNQINKIRTEITEIGVAANKLCSVEAK
LIDMNKKIDDLSESCDVNNVKEQINEETITRDALEVKITSIDAEIEVLHKHAALQAEMAL
HKTTMQTKEEEVQCFRKEHEDTIKMLLESDTLPHTKLKDKLDPVQQKLMDRIKTTTRDIQ
VEQQNLVTIKTTLKYNEEELQKKQSELQSNKQKISSICDYKDFDEVLLLQSKKVKDLQDK
RGMYAYQSTAYKEYMKQFKKQDPCCPLCHRNFDESYNMDALIKEMENDIENQPEILKRCE
ADLKMQQNKYDTMLQLKPIIEKISQLEDVEIPKLEGNLVNTKEQLTKQQASIQEKEKLKA
IPEDILHKSKNLFENIMLWDRLIDEMDNLKEKILNIEDLMAKIGANSTVTVSEAQAHRDS
LKTSLKKSRDQIEHLQTKLNTFNEKLQHAREERNILFEEQLRIQSDMQRLKELRDKQTEL
YSRQVTLIESVQKLQDRFSSEDSKLETAVCQLDLLKKENWIKDEDDRKTVTEKGRQLFEL
NKIQNEVNTFDRCNVLDALTNLEHDIKTYEEKIIENNAEKNELQTTIKDLKDDISHQETH
KRNLIDNLKLRKLQLTAQDLEQQCQNLNEKLENMNYKRMMEKWQKYKNHEESLLRKKNVA
KGKQEELERILLQYTEELKKENYRFARKNYMDKCIELTIQNEAVSDLKKYCKVLDAAMMK
YHKERMATVNKIIKKLWKAIYIGNDTSSIEIRTNDTAGTASGRRSYNYKLVQIKNGREMD
MRGRCSAGQKVLASIIIRLALAETFCKDCGVLALDEPTTNLDEENMNSLADALNMIIKMR
SRYQKNFQLIVISHDEKFLVKLAQLNNSVGYHELYRKENGLSSIRFRTMGTDPFHEPDPK
EELLLSDVEEDGRNDNSQQIQSKKRTHDNGKKDDDNHNRPAKKRFVCNF
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaatacgtcaattgtcaatttgtggtgttcggaattttgatgaacaagatcaa
ccgagaatacgttttacgcgtcctttaacgcttattcttggaccaaatggtactgggaaa
acaactttgattgaatcattaaaatttgccacaaccggtgactttccaccaggttctgat
agaggaaaagcatttattcatgataaacatacttcaggctctcgtgtagtaaaaggcttc
gttaaagctgaatttgttaatgctaatggatgtagttacacgatttgtagaacaattgaa
tgtttacattcaggcacaacgtcaagattcaaaactgtagatagtacgttaagtaggaga
gaaaagggtacaaccaaagcaatatcagttacaaatcgatgtatagatataaatgcagaa
gtaatatcagcaatgggtgtttccaaatcaatcttaaattatgtgatattttgtcatcaa
gaagaatttagttggcctttagatgatggaaaaaaattaaaagaaaagtttgatgagatc
tttgaaagtgttagatttaacaaggccctagaaaattttttaaaatgtattaaaaatatg
gaacagggtttacgtgtttttaaagtacaaaaagatgcattgaaaaatgttgttagtgaa
gtagaagacaaagagaaaaaacgtcaaaatgcaagggacagattagaagatactacaaat
gaaataacaacaatcaatgaagaacttgaacctataatggaaaaaattcgtgaaattgaa
aaaatggatgcacagcataaaactttagtagctgaaaaagataagaagcaattagaatat
gatatcaacaaacaacaaattgaatctttacaagagaatatacaagtttttgaaggaagc
ataactgaattaactaaccaattagaacaatatgatagtaatttattaaagaaagcttct
gaaataacagaggtagaaaagcagttacaacaaattgcatcgagtgaagtcaagataata
aatataataacagaaaaaagaatttctgttggtacattaaagcaaaaaatgcaagatcaa
gagaaaaaaattgttaatcgtaataaaacgctcaataatatgttatctaaatggaatatg
gaaacactagttgataaaaatacatctgatattgaaatagcagcccttgttaaaaacctt
gataataagatagaaaatcttaagcatgaagcagaagtaaaaaggcggaagcgacatgaa
aaagaggaagaactccagaaagagattgatgtactacgttctgaacgttcaaagatagaa
tcagaaatgaatattaaagataatgaagttactgaaacaagaaatcaaataaataaaatt
cgaactgaaattactgagatcggagttgctgctaataaattatgttctgtagaagcaaaa
cttatagatatgaataaaaaaattgacgatttatccgaatcttgtgatgttaataatgta
aaagaacaaataaatgaggaaactattacaagagatgcactggaggtaaaaataacttct
attgatgcagagatagaagttttacataaacatgctgcattgcaagctgagatggcatta
cataaaacaacaatgcaaacaaaagaagaagaagtacaatgttttagaaaggaacatgaa
gatacaattaaaatgttgcttgaaagtgacacattacctcataccaagctaaaagataaa
ttggatccagtacaacaaaaattaatggatcgtataaaaacaacgactcgtgatatacaa
gtagaacaacaaaatttagtaactataaaaacgacattgaaatataacgaagaagaactt
caaaagaaacaatcagaattacagtctaataaacagaaaatatcttctatttgtgattat
aaagattttgatgaagtgttattgttacaatcaaaaaaagtaaaagatttgcaagataaa
agaggaatgtatgcatatcaaagtactgcttataaagaatatatgaagcaattcaaaaaa
caagatccttgttgtcctttgtgccatagaaattttgatgagtcatataatatggatgct
ttaataaaagaaatggaaaatgacatcgaaaatcaacccgaaattcttaagcgttgcgaa
gctgacttgaaaatgcaacaaaataaatatgatactatgttacaattaaaaccaattata
gaaaagataagtcaattggaagatgttgaaatacctaaattagaagggaatttagtaaat
acaaaagaacaattgacaaagcaacaagcaagtatacaagaaaaagaaaagttaaaagct
attcctgaagatattttgcataagtccaaaaatttatttgaaaatattatgctttgggac
cgattaatagatgagatggataatcttaaggaaaaaatacttaatatcgaagatctaatg
gctaaaataggagctaatagcactgtaactgtctctgaggcacaagctcatcgagattca
ttaaaaacttctttaaagaaatctcgcgatcaaatagagcatttacagacaaaattaaat
acattcaatgaaaaattgcaacatgctcgggaagaacgaaacattttatttgaagaacaa
ttaagaatacaatcggatatgcaaagattaaaagaattgcgagataaacaaacggaatta
tactcacggcaagtaacattgatagaatcagtgcaaaaattacaagatagattttcatcc
gaagacagcaagttagaaacagctgtttgtcaactggatctattaaaaaaagaaaattgg
ataaaggacgaggatgacagaaaaacagtaacagaaaaaggaagacaattatttgagttg
aataaaattcagaatgaagttaatactttcgatcgatgtaatgttcttgatgctttaacg
aatttagaacatgatataaaaacttatgaagaaaaaattattgaaaataatgctgagaaa
aatgaattgcaaacaacgattaaagatctaaaggatgatatcagtcatcaagaaactcat
aaaagaaatttaattgataatcttaaattacggaaacttcaattaactgcacaggattta
gagcaacaatgtcaaaatttaaatgagaagctcgaaaatatgaattacaaacgaatgatg
gaaaagtggcaaaagtacaaaaatcatgaagaaagtttgttacgaaagaaaaatgtagca
aagggaaagcaagaagaattagaaaggatattgttgcaatatactgaagaacttaagaag
gagaattatagatttgctcgtaagaattacatggataaatgtatcgaattaacgatacaa
aatgaagcagtgtcagatttaaaaaaatactgcaaggtattagatgctgcaatgatgaaa
tatcataaagaacgtatggcgaccgtaaataaaataattaaaaaactttggaaagccata
tatatcgggaatgatacatcttctatagaaatccgtacaaatgatactgcaggtacagcg
tctggacgcagatcttataattataaattagtccagataaagaatggaagggaaatggat
atgcgaggacgttgcagtgcaggtcaaaaagttttagcatcaattatcataagacttgca
ttagctgaaactttttgcaaagattgtggagttcttgctcttgatgagccaactacaaat
ttagatgaagaaaacatgaacagtttagcggatgctctcaatatgattataaaaatgaga
tcacgatatcaaaagaatttccaactgatcgtgattagtcacgatgagaaatttttagta
aaactagctcagctaaataatagcgttggctatcatgaactttatcgtaaggaaaatggt
ctatcatcaattcgatttcgtacaatgggaacagatccctttcacgaaccagatcctaaa
gaagaacttttattatctgatgtggaggaagatggaaggaatgataactcccaacaaata
caatcgaaaaaaagaacccacgataatggcaaaaaggatgatgataatcacaatagacca
gcaaagaaacgatttgtttgtaatttttaa
DBGET
integrated database retrieval system
