Vespula pensylvanica (western yellowjacket): 122637428
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Entry
122637428 CDS
T07720
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03020
RNA polymerase
vps03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122637428
09124 Replication and repair
03420 Nucleotide excision repair
122637428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vps03021
]
122637428
03400 DNA repair and recombination proteins [BR:
vps03400
]
122637428
Enzymes [BR:
vps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122637428
Transcription machinery [BR:
vps03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
122637428
DNA repair and recombination proteins [BR:
vps03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
122637428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
122637428
NCBI-ProteinID:
XP_043685454
LinkDB
All DBs
Position
2:complement(8323301..8327896)
Genome browser
AA seq
1175 aa
AA seq
DB search
MYALEDDQYDDEDAEEISSKLWQEACWIVINAYFDEKGLVRQQLDSFDEFIEMSVQRIVE
DSPQIDLQAEAQHTSGEIENPVRHLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIEKDGEDPIETQHQKTFIGKIPIMLRSKYCLLAGLSDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKAEIRSCLEHSSRPTSTLWINMM
AKSGASIKKSAIGQRIIAIIPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGTRGARPGVTKEKRIKYAREILQKEMLPHVGISDFCETK
KAYFLGYMVHRLLSASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRLYAQ
KFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPDQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRISRPLLIVEGQNLLLKKRHIDMLKERDYNNDGWQELVGSG
VVEYIDTLEEETVMIAMSPEDLRQEKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKRIGDQEEQFEKPTRQTCQG
MRNAIYDKLDDDGIIAPGIRVSGDDVVIGKTITLPETDDELDSTTKRFTKRDASTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFSCE
GLTPDIIINPHAIPSRMTIGHLIECIQGKVSANKGEIGDATPFNDAVNVQKISTLLQEYG
YQLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHICNFCGLIAIANLRNNTFECKG
CKNKTQISQVRLPYAAKLLFQELMAMNIAPRLMVA
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtacgctcttgaagatgatcagtatgatgatgaagatgctgaagaaatttcttcaaaa
ttatggcaagaagcttgttggattgttattaatgcttatttcgatgaaaaaggtctcgta
cgacaacagcttgacagttttgatgaattcattgaaatgtcagttcagcgaatcgtcgag
gattctccgcaaattgatttacaagcagaagctcaacatacttctggagaaatagagaat
cctgtcagacatttattgaaatttgaacaaatttatttatccaaacctacacattgggaa
aaagatggcgcaccgtcacctatgatgccaaatgaagccagacttagaaatttaacttat
tcagcacctttatatgttgatatcactaaaactattgagaaggatggtgaagatcctatt
gagacacaacatcagaaaacatttataggaaaaattccaattatgttaaggtccaaatat
tgtctccttgctggtttgtctgatcgtgatttaacagaattaaatgaatgtcctttggat
cctggtggttattttatcattaatggatctgaaaaagtacttatagcacaagaaaaaatg
gcaacaaatacagtttatgtgtttagtatgaaggatggtaaatatgcatataaagctgag
attagatcttgtttggaacatagttcacgtcctacttctacattatggattaacatgatg
gcaaaaagtggtgctagtattaaaaaatcagcaattggacaacgtattatagctattata
ccatatattaagcaagaaattcctatcatgatagttttccgtgcacttggttttgtagct
gatcgtgatattctggagcatattatttatgactttgacgatcctgaaatgatggagatg
gtaaagccttcattagatgaagcctttgtcatacaagagcaaaatgtagctttaaatttt
attggtactcgaggtgctagacctggagtaacgaaagaaaaacgtataaaatatgctaga
gagattttacaaaaagaaatgttacctcatgtaggtatcagtgatttttgtgaaacgaaa
aaagcctattttcttggttatatggtacatagattactatcagcatccttaggacgaaga
gaattggatgatcgagatcattacggcaataagagattagatttagctggtccactatta
gcatttttatttagaggtttattcaaaaaccttatgaaagaagtacgcctatatgcacaa
aaatttatagatcgtggcaaagattttaatcttgaacttgctattaaaacaaaaataatt
accgatggtctgaggtattcactagctactggtaattggggagatcaaaaaaaagctcat
caagcaagagcaggagtttcacaagtgttaaatagattaactttcgcatcaactttatct
catttaagaagagtaaattctcctattggaagggatggaaaactcgcaaaaccacgtcag
ttgcataacacactatggggtatgttatgtcctgcagaaactcctgaaggtgcagctgtt
ggtttagttaaaaacttggcattgatggcatatattagcgttggatctcagccatctcca
atattagaatttctggaagaatggtctatggaaaatttagaagaaatagcaccaagtgca
attgctgatgctacaaaaatatttgtgaatggttgttgggttggaatccatagagatcca
gatcaattaatggctactttgcgtaagttaagaagacaaatggacattattgtgtctgag
gtatcaatgatccgagatattagagatcgtgagataagaatatatacagatgctggaaga
atcagtaggcctctattaattgtagagggacaaaacttattgttaaaaaagagacatatt
gatatgttgaaggaaagagattataacaatgatgggtggcaagaattagtcggcagtgga
gtagtagaatatatagatacactcgaagaagagaccgttatgattgctatgtcacctgaa
gatcttaggcaagaaaaggaatatgcttattgtacaacttatacacattgtgaaatacat
cctgccatgattctaggggtttgtgcttccattattccatttcctgatcacaaccaaagt
cctaggaatacttatcaaagtgctatgggtaaacaagctatgggagtttatataacaaac
ttccatgtacgaatggatacattagcccatgtactttactatcctcataaaccgttggtt
actaccagatctatggaatatcttagattcagagagcttcctgcaggaattaacagtata
gttgctattttatgttatactggatataatcaagaagatagcgttattctaaatgctagt
gcagttgagagaggtttctttaggtctgttttctaccgatcttacaaagattctgaatct
aaaagaattggtgatcaggaagaacagtttgaaaaaccaacacgacaaacttgtcaagga
atgcgcaatgcgatatatgataaattagatgacgatggaattattgctcctggtattcgt
gtatcaggtgatgatgttgtgataggcaaaactattactcttccagaaacagatgacgag
ttggacagtacaaccaaacggtttacgaaaagggatgcatctactttcttacgtaatagt
gaaaccggaattgtagatcaagtgatgttaacattgaatagtgagggatacaaattttgt
aaaatcagagttcgaagcgtacgcataccgcaaattggtgataaatttgcttcgcgtcat
ggacaaaaaggcacttgtggtatccaatacagacaagaagacatgccattttcatgtgaa
ggacttacacctgatataattattaatcctcatgctattccatctcgtatgactattggt
cacttgatcgaatgtatacaaggaaaagtgtcagcaaataaaggtgaaattggtgatgct
actccgtttaacgatgcggtcaatgtacaaaaaatttcgacgcttttacaagaatacgga
tatcaactaagaggcaatgaagtaatgtataacggacatactgggcgtaaaattaatgct
caagttttcttaggtccaacttattatcaacgtttaaaacacatggtggatgataaaatt
catagtagagcaagaggacctgtacagatattagttcgacaaccgatggaaggtagagca
agagatggtgggttgcgctttggtgaaatggaacgtgattgtcaaatttcacatggtgct
gctcaatttttgagggaacgtttatttgaggtttctgatccatacagaattcatatatgc
aatttttgtggattaattgcaatagcgaacttacgtaataatacattcgaatgcaaaggt
tgtaagaacaaaacacagatctcacaagtcagattaccatatgcagcaaaattacttttc
caagaattaatggctatgaatattgcaccaagattaatggtagcataa
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