Vespula pensylvanica (western yellowjacket): 122637677
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Entry
122637677 CDS
T07720
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122637677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vps03019
]
122637677
Messenger RNA biogenesis [BR:
vps03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122637677
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
122637677
NCBI-ProteinID:
XP_043685912
LinkDB
All DBs
Position
2:9472837..9474582
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AA seq
287 aa
AA seq
DB search
MDSQYKIIHPVKHLHDHLAQDVRPDGRQFLSFRPISVNVSSVTRADGSAVFKIGNTTVIC
GIKAELTKPKVETPDCGYIVPNVELSPLCSPKFHPGPPTEEAQVMSKLIDNILMNSAAVD
LKNLCIYKTKLVWVLYCDLLCINYDGAVIDACVGALTTALKCLTLPQIIYDPSNGNINVE
RKIKFRFPVKALPVSTTFAIFDGQLLIADPTNDEERLSLGKLIIVSDEEAICCIHKPGGI
PVSQDLFIKGLAKSKQRADVVRTLINTAILTIEEKLDSSNKNTILNK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggattcccaatacaaaataattcatccagtgaagcacctacatgatcatctagctcaa
gatgtaagaccagatggaagacaatttctgtcgtttcgtcctataagtgttaatgtatct
tcagtaactcgagcagatggttctgctgtatttaaaattggaaacactacagtaatttgt
ggcatcaaagctgaattaacaaagccaaaagtagaaacacccgactgtggttatattgtg
cctaatgtcgagctttctccattatgctctccaaaatttcacccaggtccgccaactgaa
gaagcacaagttatgtctaagctaatcgataatatcttaatgaattctgctgcagtagat
ttaaaaaatttgtgcatttataaaactaaattagtgtgggtattatactgtgatctttta
tgcatcaattatgatggtgcagttatagatgcgtgcgtaggtgctttgacaactgccttg
aaatgcttaactttaccacaaataatttatgatccaagtaatggaaatattaatgtagaa
cgtaaaattaaattccgatttccagttaaagcattgcctgttagtacaactttcgctata
tttgatgggcaacttttaatcgctgatccaacaaatgatgaggaacgcttgtcattagga
aaattaataatagtttcagatgaagaagcaatatgttgtatacataaacctggtggtatt
ccagtatcacaagatttatttataaaaggtttagcaaaatctaaacaaagagcagatgta
gtgcgaacattaataaatactgctatattaacaatagaagaaaaattggattcatcaaat
aagaatactattctaaataaataa
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