Vespula pensylvanica (western yellowjacket): 122637777
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Entry
122637777 CDS
T07720
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
vps
Vespula pensylvanica (western yellowjacket)
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vps03021
]
122637777
03036 Chromosome and associated proteins [BR:
vps03036
]
122637777
Transcription machinery [BR:
vps03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
122637777
Chromosome and associated proteins [BR:
vps03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
122637777
SLIK complex
122637777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
HTH_CHD1_Hrp3
CHD1-like_C
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
122637777
NCBI-ProteinID:
XP_043686063
LinkDB
All DBs
Position
2:18046482..18061170
Genome browser
AA seq
1822 aa
AA seq
DB search
MTKHRVSKPRAALPFPVRCATGLWKTIESESGKESGSDSENESKSDSSSSGSNSGSASAT
DSDSSSSSGSGSGSGSESDKSEQLDAPAQSDSLQSKSSNHSTDAKLRLKNESSREWDENP
DIYGIRRSGRSRKEPERLATQRESDSEGRKRYKKKGSHNSWNSESSESESDESENRRPPP
SKSLNRRAAQKAKEKARARKKRISESSDNSSFDSDDNRRQVTRRTGTAVSYKEESEEGTD
SEDLVEIDETTTTNAEPDNAETVERILGQRRGKKGVTGNVTTIYAVEENGDPNPKDLNTE
ETETQYLIKWKGWSHIHNTWESEESLKAQKVKGLKKLDNFIKREREIKQWREYAGPEDID
YFECQLELQQELLKSYNNVERIIAEYEKPDSEHPDYYCKWESLPYAEATWEDGALIVKKW
PVKIKEFRDREDSKRTPSKHCKVLKIRPKFHQLKGQPEYMGKGKDLVLRDYQMDGLNWMI
HSWCKENSVILADEMGLGKTIQTICFLYYLFHTHQLHGPFLLVVPLSTMTSWQREMAQWA
PDMNFVTYLGDVTSRNVIREYEWCYSSKRLKFNAILTTYEIVLKDKAFLGALNWAVLLVD
EAHRLKNDDSLLYKALSEFHTNHRLLITGTPLQNSLKELWALLHFIMPAKFNSWEEFEKE
HDNAAQKGYSKLHKQLEPFILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNY
NALRKGVKGSTMTFLNIVIELKKCCNHAFLTKPTENERKDNNDDYLQQLIRGSGKLVLLD
KLLVRLRETGHRVLIFSQMVRMLDILGEYLQKRHFPFQRLDGSIKGELRKQALDHFNAEG
SPDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVT
KNSVEEEIVERAKQKMVLDHLVIQRMDTTGRTVLDKKNAGTNNNPFNKEDLNAILKFGAE
ELFKDEEDGDEEPTCDIDEILRRAETRDEGPTTVGDELLSAFKVASFAAFEEESEPVNQP
NDNDDESKDWAEIIPENFRKKVEEEEKSKEMEDLYLPPRSRKTLQQINQTGDGRGRKRKK
TPDDSEEGEESGSEVEGSDDDRPKKRGRPRVTPRENIKSFTDVEIRRFVKSYKKFTAPLK
RLDDIAADAELQEKPMSELRYLGEQLQSRCEACLSEFESTAKENKGEEEGKGPGRKRGRG
PTFKMGGVMVNAKSFSAAVKELEPLDQALPSDAEQRANWHLDIKVKPANFDCDWNSEDDS
RLLRGIYQHGMGSWEAIKTDASLKLGDKILPNGSKVQSKRVSARAEYLLKVLKKQMDFKH
GVTRARKPRKPKEVKTAITKEIIEENESSGEESKKLKTKIDKILIKKEEDVIVKKEIKEE
PEEASEEKKKEKKVKKDKKENKKTKKNKQTAGPMHFTANNEPRALDVLGDLDPSIFNECK
EKMRPVKKALKALDRPDQSLSEAEQVAHTRHCLVQIGNQINTCLAEYKDPEQIKEWRSNL
WYFVSKFTEFDAKKLYKLYKHATRKGGGDSNVSVTSSPEKKEDTSNSKKHEKSYDKHNDK
QLADSSNKDRQIKRRIDDIEDSSNSSIPSKKHVTAINAMSNISNTSAVTIGAITITPITS
TANSTSSTTNTTDTSRHKEQKDSKSKDMKRDRERDRDRDRSHNDRGMDRLNCGKDERIRR
DSGSYNMGGHYSGSREDDHWILPRDTRDMRDGRFTDHKRDRFESYGRLSGGYHRDRERDR
DRGMHINDKRSNFYRYPSGPPSYGYGPGSYGSGGGGYAPNDMPPSHFRGRGYPGDSYSNE
WRPSKDYRRDYDRRPPPPNANS
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagcatcgcgtctcgaaacctcgggcggcccttccttttccggtgcgatgtgcc
acgggtctttggaaaacaattgaatcggaatctggtaaggaatccggatctgactctgaa
aacgagagcaaaagtgacagttcctcatccggaagtaattcaggatctgcctctgctaca
gatagtgactctagctcttcgagcggttctggttctggatctggttctgaatctgataaa
tcagagcagttggatgcacctgcacaaagtgatagtttacaaagcaaatcctctaatcac
agcacagatgcaaaacttaggcttaaaaatgagtctagtcgtgaatgggatgagaatcct
gatatatatggcattaggagatccggacgttctagaaaagaacctgaaagacttgcaaca
caacgcgaaagtgatagtgagggtcgcaagagatataagaaaaagggttcacacaattcg
tggaattcagaaagttcagaatctgaatctgatgaatcagaaaatagacggccaccacct
agcaagtctttgaacagacgcgcggcacaaaaggctaaagaaaaagctagagcacgaaaa
aagcgtatttccgaatcttctgataattcttcgtttgatagcgatgataacagaaggcaa
gttacaaggagaacgggtactgcagttagttataaagaagagagtgaagaaggtactgat
agcgaagatttggtcgaaatcgatgaaacaacaactacaaatgcagaacctgataacgcg
gaaacggttgaaagaattttgggacaaagaagaggaaagaagggtgttacaggaaatgtc
accacgatttatgcagtagaagaaaatggtgatcctaatccaaaggatttaaataccgag
gagactgaaacacaatatttaattaaatggaaaggatggtcgcatatacacaatacgtgg
gagtcagaagaatctttaaaagcacaaaaagttaaaggattaaaaaaattagataatttt
ataaaacgagaacgagaaattaaacaatggagagagtacgcaggacctgaggatatagat
tattttgaatgtcagttagaattgcaacaagaacttttgaaaagttataataatgtggaa
agaattattgctgaatatgaaaagccagattctgaacatcctgattattattgtaaatgg
gaaagtttgccatatgccgaggcaacgtgggaagatggagctttaatagttaaaaaatgg
ccagtaaaaataaaagaatttcgggacagagaagattccaaaaggacaccgagtaaacat
tgcaaagtccttaaaatcagacccaagtttcatcagctaaaaggacagccagaatatatg
ggtaaaggaaaagatttagtcctgagagattatcaaatggacggattaaattggatgatc
cattcatggtgcaaagaaaatagcgttatcctggcagatgaaatgggtcttggaaaaacc
atacaaactatatgcttcctttattacctatttcatactcatcaacttcacggaccgttt
ttattagtagtacctctttcaacaatgacttcctggcaaagagaaatggcccaatgggca
cccgacatgaactttgttacgtatttgggtgacgtaacatctcgaaacgtcataagagaa
tacgaatggtgttatagttcaaaaagattaaaatttaatgcaatacttacaacatatgag
atagtacttaaagataaagcatttttgggtgccttaaattgggcagtgcttttagtggac
gaagctcatagattaaaaaacgatgattctctcctttataaagctttatccgaatttcat
accaatcatcgtcttttaataacaggtactccattacagaacagtttaaaggagttatgg
gcgttacttcatttcataatgcctgccaaatttaattcttgggaagaatttgaaaaagaa
cacgacaatgctgcccagaaaggttattctaagttacacaaacagttagaaccttttatc
ttaaggcgtgttaaaaaggacgtagaaaaatcattacctgcaaaagtcgagcaaatctta
cgcgtagaaatgacttctttgcaaaaacaatattacaagtggatattgacaaaaaactat
aacgccttgcgtaaaggagttaaaggatctactatgacgtttctcaatatagtgatagaa
cttaagaaatgttgtaatcacgcttttttaacaaaacctactgaaaacgaaagaaaagat
aataacgacgattatctgcaacaactgatcagaggttcaggaaaattggtccttttggat
aaattgttagtgcgacttcgtgaaactggacacagagtattgatatttagtcagatggta
agaatgttggatattctcggagaatatttacaaaaacgacacttcccattccaacgatta
gatggaagtataaaaggagaattgagaaagcaggcgttagatcattttaatgccgaaggt
tcgccagatttttgtttcttgttatcgaccagagctggcggactcggcataaatcttgcc
actgctgacaccgtgataatcttcgactcggattggaacccgcaaaacgatttacaggca
caagcgagagcccatcgaattggacaaaaaaatcaagttaacatatatcggttggtaaca
aaaaattctgtagaggaggaaatcgttgaacgagcgaaacaaaaaatggttctcgatcat
ttggtcattcaaagaatggataccactggaagaacggtcttggataaaaaaaatgctggg
accaacaataacccatttaataaagaagacttaaacgctatattaaaatttggagcagag
gaattattcaaagacgaggaggacggagacgaggagcctacgtgcgacatcgacgaaatt
ttaagaagagccgaaactagagacgaaggacctaccaccgtaggagacgaattgttatcg
gcattcaaagttgccagtttcgctgcatttgaggaggaatcggagccagtcaatcaacct
aacgacaatgacgacgaaagtaaagactgggctgagataataccagaaaattttcgaaaa
aaagtcgaagaagaagaaaagtctaaggagatggaagatctttaccttccgccaagaagt
cgtaagactcttcaacaaattaatcaaactggcgatggaagaggtagaaagaggaaaaag
acgccggatgacagcgaggaaggtgaagagtctggaagcgaagtagaaggtagcgacgac
gatagacctaaaaagagaggtagaccaagggtcacgcctcgcgagaacatcaagagtttc
acggatgtagaaattcgtagattcgtcaaaagttataagaaatttacagcgcctttaaaa
agactggacgatatcgccgcggatgcagaattgcaagagaaaccaatgtcggaattgcgt
tatttgggtgaacagctgcaatctcgttgcgaggcttgcttatccgaatttgaaagtacc
gcgaaagagaataaaggcgaggaagagggtaaaggacctggtcgtaagagaggaagaggt
cctacatttaaaatgggcggtgttatggtaaatgcaaaatcattttctgccgccgtcaaa
gaattggaaccattggatcaagcacttccgtcagatgccgaacaaagagccaattggcac
cttgacattaaagtaaaaccggcgaactttgactgcgattggaattccgaagatgactct
agacttttgagaggcatatatcagcatggcatgggttcttgggaagccattaaaacagat
gctagtttaaaactcggtgataaaattcttcctaatggtagtaaagttcaatctaaacgg
gtgagcgctcgtgctgagtacttgttaaaagttcttaaaaagcaaatggatttcaagcat
ggcgtgacccgtgcaaggaaacctagaaaaccaaaagaagtaaaaacagcaattactaaa
gaaataatagaagaaaatgagagttcaggagaagagagtaaaaagcttaagacaaaaatt
gataaaatactcataaagaaagaggaagacgttattgttaaaaaagagattaaagaagaa
cccgaggaggcgtctgaagagaaaaagaaggagaaaaaagttaagaaggataaaaaggaa
aataagaagactaaaaaaaataaacaaactgctggaccgatgcatttcacagcaaataac
gaaccacgagctcttgacgttcttggtgatttagatccatctatattcaatgagtgcaag
gagaagatgcgtccggtgaaaaaagcattaaaagctttggatagaccagatcaatcgttg
agcgaagcagagcaagtagcccatacacgccactgtctagttcaaatcggaaatcaaatt
aatacttgtcttgcagaatacaaggatcctgagcaaattaaagaatggcgaagtaactta
tggtattttgtatcgaaatttacagaatttgatgctaaaaagctatataaattatataaa
catgcaacgagaaaaggtggcggtgatagtaatgtaagtgtaacatctagtcctgaaaag
aaggaagacacgagtaattcaaagaaacatgaaaaatcatatgacaaacataacgacaaa
caattagcggattccagtaataaagatcgccaaattaagcgtagaatcgatgacatagaa
gatagttctaacagcagtatcccaagtaagaaacatgttacagctattaatgcgatgagc
aatattagcaacacctcagctgttactatcggtgctattacaattactcctataacatca
actgcaaattctacgtcgagtacaactaatacaacggatacgtcaaggcacaaagaacaa
aaagattcaaagtcgaaagatatgaaacgggatcgggaacgagacagagatagagacaga
agtcacaatgatagaggcatggacagattaaattgtggaaaagatgaacggatcagaagg
gatagcggtagttataatatgggtggacattatagtgggagtagagaagacgatcattgg
attttacctagggacacaagagatatgagagatggaagatttacggatcacaaacgtgat
agatttgaatcttatggacgtttgtctggtggatatcatcgagacagagaaagagataga
gatcgcggtatgcatataaacgataaaagaagtaatttttataggtatccatccggacca
ccaagctatggatacggtccaggtagctatggaagtggaggtggcgggtacgcaccaaat
gacatgccaccaagccattttagaggtcgaggatatccaggagatagttattcgaatgaa
tggcgacctagtaaggattatagaagagattatgataggaggccgccaccaccaaatgcc
aattcctag
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