Vespula pensylvanica (western yellowjacket): 122638014
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Entry
122638014 CDS
T07720
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122638014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vps03019
]
122638014
Messenger RNA biogenesis [BR:
vps03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122638014
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
122638014
NCBI-ProteinID:
XP_043686551
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All DBs
Position
2:6297612..6300477
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AA seq
519 aa
AA seq
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MADENEDQWLYGDSTDGKELSPTNVQIENQQNDSIPINSQEASQILEEKKNDNIPERLPE
MSENTGSPREECSLNNMQDENDPDASKNGTREASSQEDGEAASDSDSDDDVHVVIGDIKS
TPAYGSLNIKRGGLLTTASGVPDKLNKQPGKFSIDEFETIGVINGMPAHEFNLDQLEDKP
WRQPGADITDYFNYGFNEETWRAYCERQKKMRSESGVGLILNAGGGGSNPGGMRVPQVAI
TNDNSKYSGIMGPKRAGPPPGRKMAGTIDVIGSSGLASRRNLDKSPPKGNVIQVMTADRR
EYSRKPGFPDMSVPPPGAGLPPPFDMPPPGYPGEPAPFYMPETDPYYQSYEPTQDSQWGN
DPTWQPTNLAIPMTEGEEEKDIGPKTIPTMVPPISIPPLMPPRDQRDIRERERDRDRDRE
RERDLDSMGREREREKERERDREREKDSMIRDRDRERDSVARDEERDRDRSRSQYRHKER
HRHRSRSRSRRHKSRSRSPSRRKKKSRRSDRERSKEESE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaaaacgaagatcagtggttatacggagattcaacggatggaaaagagtta
tctccgacaaatgttcaaattgaaaatcaacaaaatgattcgatacctattaattctcaa
gaagcatcacagattttggaagaaaagaaaaatgataatattccagagagattaccggag
atgtcagaaaatacaggttcacctagagaggaatgttcattgaataatatgcaagatgaa
aatgatcctgatgctagtaaaaatggtacaagagaggcttctagtcaagaggatggagaa
gctgcaagtgattcagattcggatgacgacgttcatgtagttatcggtgatattaaatcg
acaccggcatatggtagtttaaatattaaaagaggtggtttacttacgactgcgtcaggg
gtaccagataaactgaataaacaacctgggaaatttagtatagatgaatttgaaacaatt
ggggttatcaatggaatgccagctcatgaatttaatttagatcagttagaagataaacca
tggagacaacctggtgcggatataacagactatttcaattatggtttcaatgaagaaact
tggagagcttattgcgaaagacagaaaaaaatgagaagcgagtctggagtaggtttgata
ctaaatgcagggggaggtggaagtaatccaggtggtatgcgagtaccgcaagtagcaatt
actaatgataacagtaaatactctggtatcatgggaccaaaacgagctggaccacctccg
ggaagaaaaatggctggcactatagatgttataggaagttcaggcttagcttctagaagg
aatcttgataaatcaccgcctaaaggaaacgtaatacaagtgatgacagcagatagaagg
gaatattcaagaaaaccaggttttccagatatgagcgttccaccaccgggagcaggattg
cctccaccattcgatatgccacctcccggatatcctggagagccagctcctttctatatg
cctgagactgatccttactatcaaagttacgaacctactcaggatagtcaatggggtaac
gacccaacctggcaaccgacaaatttagccattccaatgacagaaggtgaagaagagaaa
gatataggtcccaaaacgatacccacaatggtaccaccgatatctattccacctttgatg
ccacctagagatcaacgagatattcgagaacgtgagagggatagagatcgagatagggaa
cgtgaaagagatttggactcgatgggtagggagagagaaagggaaaaagaaagggagcgt
gatcgtgaaagggaaaaagattcgatgatcagagatcgtgatcgagaaagagactccgtt
gcacgagacgaagaaagagatcgcgatagatcacgatcgcaatatcgacataaagagagg
cataggcatcgttcaaggtcacgatctcgtagacacaaatcgcgatcgcgaagtccgagt
agacgtaagaagaaatcaagacgctccgacagggaacgttctaaggaagaaagcgaataa
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