Virgibacillus pantothenticus: KBP50_00375
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Entry
KBP50_00375 CDS
T07430
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vpt
Virgibacillus pantothenticus
Pathway
vpt03030
DNA replication
vpt03430
Mismatch repair
vpt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KBP50_00375 (dnaX)
03430 Mismatch repair
KBP50_00375 (dnaX)
03440 Homologous recombination
KBP50_00375 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpt03032
]
KBP50_00375 (dnaX)
03400 DNA repair and recombination proteins [BR:
vpt03400
]
KBP50_00375 (dnaX)
Enzymes [BR:
vpt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KBP50_00375 (dnaX)
DNA replication proteins [BR:
vpt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KBP50_00375 (dnaX)
DNA repair and recombination proteins [BR:
vpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KBP50_00375 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
DnaX_C
AAA_30
RuvB_N
AAA_22
AAA_19
TIP49
AAA_5
PIF1
RCF1-5-like_lid
AAA_16
AAA_2
Mg_chelatase
AAA_assoc_2
AAA_14
AAA_24
Glyco_tranf_2_5
AAA_28
CEP44
Rad17
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QTY16483
LinkDB
All DBs
Position
84757..86448
Genome browser
AA seq
563 aa
AA seq
DB search
MSYQALYRVWRPTVFADVVGQAHITRTLQNAIAQEKFSHAYLFSGPRGTGKTSAAKIFAK
TINCERSPVREPCNQCAACKGIQNGSISDVIEIDAASNTSVEDIREIRENVKYASSQVPY
KVYIIDEVHMISVNAFNALLKTLEEPPSHVVFILATTEPHKIPLTILSRCQRFDFKPISN
TSIINRLQTIVEAEGVTVSKEALDTVALAAEGGMRDALSILDQAISYSDESVELEDVLAV
TGGVSQHTLTNIIRHMYEKNVQQAVMELNELIQKGKDPARFVYDMIYFLRDLLLYKSAPT
LEGLLERARVDEPFQVLADTVPNQWIQEAMRQLNQCQQEIKWTNSPKVYIEIAILTIANG
IQEQVENNNSLADSDTITRLSSQVGKLEKEIKLLKENPVIPTQPASQRESRKAPNRSAKN
TYKIPYERIRHVLSEAEKSALKQVHSQWGTFLGQLKKASAPAHATIQDSKPAAASDQALV
VAFKYEIHCSLFLDNQETVESVLTSVLGKTLTIIPIPEKDWVELRNEYVAKQEKTSAKEE
MTEDPVVTEAQKLFGDDIIEIHD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggctttatatcgcgtttggcgtccgacggtttttgccgatgtcgttggg
caagcccatattactcgaacattgcagaatgcgattgcacaggagaaattctctcatgct
tatttattctctggaccaagaggaacaggaaaaacgagtgctgcgaagatttttgccaaa
acaatcaactgtgaacgttccccagttagggagccgtgtaatcaatgcgctgcatgtaaa
ggaattcagaatggatcgatttccgatgtcattgagattgacgctgcttccaatacaagc
gtagaggatataagagagattagagaaaatgtaaaatacgcttccagccaggtaccttac
aaagtatatatcattgatgaggtacacatgatatcggtaaatgcttttaacgccttactg
aaaacgctggaagaaccaccaagccatgtagtatttattttggcgacaacggaaccacat
aaaatcccactaaccattttatccagatgccagcggtttgattttaagccgatctccaac
acttctattatcaatcgattacaaacgattgtggaagcagaaggggttactgtatctaag
gaagctttagacaccgtagcattggctgctgaaggtgggatgcgtgatgcgttaagtatt
cttgatcaagctatctcctacagtgatgaatccgtagaactggaggatgttttagctgtt
actggtggggtctcccaacacacattaacgaatattattcgtcatatgtatgaaaaaaat
gtccagcaagcggtaatggaattgaatgaattaattcaaaaaggaaaagatcctgctcgc
ttcgtttatgatatgatttatttcttgcgtgatttgctgttatacaagagtgctccaaca
ttggaaggattattggaacgagcgagggtggatgagccttttcaagtgttagcagatact
gtaccaaaccaatggatacaggaagcaatgagacaattaaatcagtgtcaacaggaaata
aaatggacgaatagcccaaaagtttatattgaaattgctattttaacgatagccaatggt
atacaggaacaagtggaaaacaataattccttggcagattcagatacgattacaagactt
tcttcacaagttggcaagctggaaaaggaaatcaagctgctgaaggaaaatccagtcata
ccaacacagccagcatcacagcgtgaaagcagaaaagcacctaatcggtctgcaaaaaac
acgtataaaataccttacgagcggattcgacatgtgttgagtgaagcagaaaaatcagcc
ttaaagcaagttcactcccaatggggaacatttttagggcaattgaaaaaggcaagcgct
cctgcacatgctacgattcaggatagtaaacccgcagcagcatccgaccaagcgcttgtc
gtagcgtttaaatatgagattcactgttcattgtttttagataatcaggaaacggtggaa
tccgttttgacttctgtattaggaaaaacgttgaccattattccgatcccagagaaggat
tgggttgaacttcgcaatgagtatgttgccaaacaagaaaaaacatccgccaaagaagaa
atgactgaagatccagttgtgacagaagcacagaaactttttggtgatgatataatagaa
attcacgattaa
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