Virgibacillus pantothenticus: KBP50_01050
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Entry
KBP50_01050 CDS
T07430
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vpt
Virgibacillus pantothenticus
Brite
KEGG Orthology (KO) [BR:
vpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpt03016
]
KBP50_01050 (truA)
Enzymes [BR:
vpt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
KBP50_01050 (truA)
Transfer RNA biogenesis [BR:
vpt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KBP50_01050 (truA)
Prokaryotic type
KBP50_01050 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
PPIase_AIP
Motif
Other DBs
NCBI-ProteinID:
QTY16593
LinkDB
All DBs
Position
209357..210097
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AA seq
246 aa
AA seq
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MQRLKCTLQYDGSGFSGFQIQPGKRTVQGILENALLKMHKGEPVRIHPSGRTDTGVHAKG
QTIHFDSPYSISLYNWKQALNTLLPHDVYVKQVETVPDTFHARYDVVEKEYRYYVYHKEE
PDVFKRNYSYFFPYALDLTAMQAACRYLEGTHDFTTFSSAKATTRGSKQRTLYQVSCEKS
RSEIEFIFRGSGFLYNMVRIIVGVLLDIGQGRRKPADIDVLLSKRDRRAVGETVPSQGLY
LWRVTY
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgactaaaatgtacacttcaatatgatggctctggtttctccggctttcaaatc
cagcccgggaaaagaacggtgcaggggatattagaaaatgcattactaaaaatgcataag
ggtgaacctgtacgcattcatccatcggggcgaacagatacaggtgttcatgcaaaagga
cagacgatccactttgattcgccctatagcatctctttatacaactggaagcaagcattg
aatacattgcttccccatgatgtatatgtgaaacaggtggagacggttccagatacattt
catgcccgctatgatgtagttgaaaaggaatatcgctattatgtttaccataaagaagaa
ccagatgtatttaaacgcaattactcttactttttcccgtatgctctagatttaacggcg
atgcaagctgcatgtcgttatttggaggggacccatgatttcaccactttttcttctgcc
aaagcgacaactagaggtagtaagcaacgaacactctatcaagtatcctgtgaaaagagc
agatcggaaattgaatttattttccgtgggagcggctttttatacaatatggtgcgaatt
atagtaggtgtattattagatataggacaaggaagacgtaaaccggctgatatagacgtt
ttgctgtcaaaaagggatagaagggcagtaggcgaaacagtgccttcacaaggcctctat
ttgtggcgtgtgacgtattga
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