KEGG   Virgibacillus pantothenticus: KBP50_04180
Entry
KBP50_04180       CDS       T07430                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vpt  Virgibacillus pantothenticus
Pathway
vpt03030  DNA replication
vpt03430  Mismatch repair
vpt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vpt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KBP50_04180
   03430 Mismatch repair
    KBP50_04180
   03440 Homologous recombination
    KBP50_04180
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vpt03032]
    KBP50_04180
   03400 DNA repair and recombination proteins [BR:vpt03400]
    KBP50_04180
Enzymes [BR:vpt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     KBP50_04180
DNA replication proteins [BR:vpt03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     KBP50_04180
DNA repair and recombination proteins [BR:vpt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     KBP50_04180
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1 3HBD
Other DBs
NCBI-ProteinID: QTY17099
LinkDB
Position
855069..855683
AA seq 204 aa
MTFVSIDFETANEKRTSPCAVGIVVSNGLQIVDEYYSLINPLTDFRTMNMQIHGITPEHV
RYAPTFSDIWPVLQTYLQQGMVIAHNASFDMSVLRHTLDHFQLAYPDLGYLCTVMLSKQL
WPQLHNYKLDTLAAYHQIPFDHHHALEDARVAAKLLSKALHESGQHTIEGLLTAYQIQSG
KIFQHGYTPPKKKKSHQRKRIYLS
NT seq 615 nt   +upstreamnt  +downstreamnt
atgacattcgtatcgattgattttgaaactgcaaatgaaaaacggacaagcccttgcgca
gttggtattgtcgtctctaatggactacaaatagtagatgaatattatagcttaatcaat
ccacttacagattttcgaacaatgaatatgcaaatacatggtattacgccagagcatgtc
cgatatgctccaacgttttctgatatttggccagtcctccaaacatatttacagcaaggc
atggttattgcacacaatgctagctttgatatgagtgtcttaagacatacattagatcat
tttcaattagcttatccagatctgggttatctttgcacagtgatgctttcgaaacaacta
tggccacaattacataattacaagttagatactttggcagcataccatcaaattcctttc
gatcatcaccacgctttagaagacgcacgtgtagcagcgaagcttctttcaaaagcgtta
cacgaaagtggacaacatacgatcgaggggttattgacagcttaccagattcaaagtggc
aagatttttcagcatggctatacaccgcctaagaagaagaaatcgcatcaacgtaaacgc
atctatctttcctaa

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