Virgibacillus pantothenticus: KBP50_04765
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Entry
KBP50_04765 CDS
T07430
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
vpt
Virgibacillus pantothenticus
Brite
KEGG Orthology (KO) [BR:
vpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpt03019
]
KBP50_04765 (yhaM)
Messenger RNA biogenesis [BR:
vpt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KBP50_04765 (yhaM)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
DUF3921
Hormone_recep
Motif
Other DBs
NCBI-ProteinID:
QTY18416
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All DBs
Position
1006446..1007390
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AA seq
314 aa
AA seq
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MKKGIRHASIGEAYEGFLLIREAIKGLTSNGKPFLTLMLRDATGEIEAKLWDATSEDETL
FVAEQIVRVAGEINQFRGKPQLKIFSIRPSQPTDDVKIDDFVEKAPVNKESLIEKLTEAI
FEMQNPNLQRIVRAFIKKYQEELLSYPAATKNHHEYASGLAHHIVSMLAIAKEIHKLYPE
INKDLLYAGIILHDMAKIKELSGVVSTTYTLKGKLLGHIPMMVEEIGTMAKEMDIEGEEI
TVLQHVVLSHHGKAEWGSPKPPLVREAEVLHLIDMLDAKLNMLNRSLEKVKPGEFTDRLF
AMDNRSFYKPLFEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagggattaggcatgcttcgatcggggaagcttatgaaggcttcttattaata
cgtgaagcaatcaagggtttaaccagtaatggaaaaccatttttaactttaatgcttcgc
gatgcgacaggagaaatagaggcgaagctatgggacgccacttcagaggatgaaacgctc
tttgtggccgaacaaattgtccgcgttgctggtgaaatcaatcaatttcgcggaaagccg
cagcttaaaattttttcgattcgaccctcacaaccaacagatgatgtgaaaatagatgat
tttgtggaaaaagctcctgtgaataaagaaagcttaatagaaaagttgacagaagctatt
tttgaaatgcaaaatccaaacttacaacggattgtacgtgcatttattaaaaaatatcaa
gaggaactactttcctatccagctgcgacaaagaatcaccatgaatatgcgtcaggatta
gcacatcatattgtaagtatgctagcaatagccaaggaaattcacaaactttatccggag
attaataaagatttgttgtatgccgggattattctccatgatatggctaaaataaaagag
ttatccggtgttgtttctactacctacacgttaaaaggaaaactgcttggacatattcct
atgatggtagaggaaattggaacaatggcgaaagaaatggatattgaaggggaagaaatt
actgtactgcaacatgtggtgttaagccatcatgggaaagcagaatggggaagtccaaag
ccgccgcttgttcgtgaagctgaagtgttacacttaatcgacatgctggatgctaaattg
aatatgctaaatcgttcgttagaaaaagtaaagcctggagagtttacagatagactattt
gctatggataatcgttccttctacaagccattatttgaggaatga
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