Virgibacillus pantothenticus: KBP50_06215
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Entry
KBP50_06215 CDS
T07430
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vpt
Virgibacillus pantothenticus
Pathway
vpt03030
DNA replication
vpt03430
Mismatch repair
vpt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KBP50_06215 (dnaE)
03430 Mismatch repair
KBP50_06215 (dnaE)
03440 Homologous recombination
KBP50_06215 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpt03032
]
KBP50_06215 (dnaE)
03400 DNA repair and recombination proteins [BR:
vpt03400
]
KBP50_06215 (dnaE)
Enzymes [BR:
vpt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KBP50_06215 (dnaE)
DNA replication proteins [BR:
vpt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KBP50_06215 (dnaE)
DNA repair and recombination proteins [BR:
vpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KBP50_06215 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HROB
SSB
Motif
Other DBs
NCBI-ProteinID:
QTY17450
LinkDB
All DBs
Position
1325276..1328629
Genome browser
AA seq
1117 aa
AA seq
DB search
MAYTHLQIRSSYSLLKSTITIEKLVKRAAELEYSALALTDEQVLHGAISFYKACQQHGIK
PIIGMTVLVGDSQTEAYEIIVLAKSNQGFHDLVKLSTWIQTQDQSFVPLEHFMPFTANCI
GILSLQHGVIQEQLRAKSFADANQHVSTYRACFGENDFYLGVESYGNGGDERTFFAEVKQ
FQKMYHDPVVAIHDVRYLNKKDVIAYDCLQAMKQQQLWDGNHIDVKWRNHHLCTEAEMRQ
FFSDWSETIDETTRIAEKCNLSFDFEKRHLPSFPLPEQEEAHPYLTAKCIKLLPQKYTEV
TAEIHQRLMYELSIIEQMKFSDYFLIVADFVDFAKTNNIVVGPGRGSAAGSLVAYVLGIT
DVDPTKYDLLFERFLNPNRKTMPDIDIDFSDVRRDEVMEYVQKKYGADHVAQIITFGTFA
ARSLMRELIKTMDINKQDASFVLRHIPVQSKRNLAQIVHESEELRNYIKRSVSLRQLFAV
AAVLEGIPRHISTHAAGIVISEAPLKEYAPLTSGTGTMYLTQYTMNDVEAIGLLKIDLLG
LRNLTLLEKVLQKIRFQTGQHISLKDIPQQDALTFSLLQQARTNGVFQLESQGMKQVLQE
LKPNEFEDIVAVNALYRPGPMDFIPTYIRRKHGLEKVTYLHPDLAPILQKTYGVLIYQEQ
IMQIAHRIAGFSLGKADILRRAVSKKQESKIEEQKSAFLKGCIQQGYSSSMANELFAWIV
RFSNYGFNRSHAVAYSIISYQLAYLKAHYPQAFFAELLSASMQQHQKLALYWKEMKELDL
TLLGPSINASFGKYAVEGKHIRMGLLQIKGIGNQAVTEIVRARKDRPFRNLFDFCLRVSL
KVINRPIIELLIMAGAFDDLYNNRASLLASIDQAMEQGELFGEFQEQGSFFANDLKLEGE
YANIEDFPQIKKLSHEKELLGIYISSHPVTAYRKLLQRAGYISLQRARKAGNGYKHQSGC
VIQFIRTIRTKRGDPMAFITISDETDEMEAVVFPELYRQVHRWWKEGMLVLVQGKLENRN
NRLQTLLSSVEILNETKLGDTCPGRLFIKLSSEDIEADLAKLKEIAFHFPGNTPVIVFQE
RLQQTYQLANDYDLHPSSRCLQRLRAYFGAEQVVLDK
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggcttatacacacttacaaataaggagcagctatagcctgttaaagagcacaataacg
attgaaaagttagtgaagcgagcagcagaactagagtattctgctttagctctaacagat
gaacaagtattgcatggtgcaatatcattttataaagcatgtcaacaacatggaataaaa
ccaattattggtatgactgttttggttggagatagtcaaacagaagcttatgaaataatt
gttttggccaaatcaaatcaggggtttcatgatcttgttaaactaagtacatggattcag
acgcaggaccagtcttttgtaccactggaacatttcatgccattcacagcaaattgtatt
ggtatactttctttacagcatggcgttatacaagaacaactgcgggcgaaatcatttgct
gatgcaaatcagcatgtatcaacgtatcgagcttgttttggggaaaatgatttttattta
ggggtagagtcgtatggaaatggtggagacgaacgaactttttttgcagaggtaaaacaa
tttcagaaaatgtatcatgacccggtagttgctattcatgatgttcgttaccttaataaa
aaggacgtgattgcatatgactgtttacaagcaatgaaacaacaacagctttgggatggc
aatcatatagatgtaaagtggcgtaatcatcatttatgtacggaagcggaaatgaggcaa
tttttctctgactggtcggagacaatcgatgaaaccaccagaattgctgagaaatgtaat
ctcagcttcgattttgaaaagcggcacctcccttcctttcctttgccagaacaggaagag
gcacatccatatttaaccgcaaaatgcattaaacttttgccgcaaaaatatacagaagta
actgctgagattcaccagcgtttaatgtatgagctttccataattgagcaaatgaaattt
agtgattactttttaattgttgcggattttgtggactttgccaagacaaacaatattgtt
gttggaccgggaagaggatcggcagcaggatctttagtagcttatgtattaggaattaca
gacgttgatccaactaagtacgatttattatttgagcgattccttaatccgaacagaaag
acaatgcctgatattgatattgatttctcagatgttcgccgagatgaagtgatggagtat
gtgcaaaaaaaatacggagcagaccacgtagcacaaattattacgtttggaacatttgct
gcccgttctttaatgagagagcttatcaaaacgatggatattaacaaacaagatgcgtca
tttgtgttacgccatattccggtacaatcaaaaagaaatcttgcgcagattgttcatgag
tctgaagagttaagaaattatattaaacgttcagtctctttacggcagttatttgcggta
gctgctgtattggaagggattcctagacatatttcgacacatgcggctggtattgttatt
tcagaagctccgttaaaggagtatgcgccgttaacttccggaaccggaacaatgtattta
acgcaatatacaatgaatgatgtagaagcgatagggctattaaagattgatttgttaggc
ttacggaacttaacacttttggaaaaggtactacaaaaaattcgttttcaaactggacaa
cacatttctttaaaggatattcctcaacaagatgcgttaaccttttcattattacagcag
gctagaacaaatggtgtgtttcaattggagtctcaagggatgaagcaagtgttgcaagaa
ttgaagccaaatgaatttgaggatatcgttgcagttaatgcattatatcgtccaggcccg
atggattttattcctacttatattaggagaaaacatgggctagaaaaagttacttacctg
catccagatcttgcgcctattttacagaaaacgtacggtgtgttaatttatcaagaacaa
attatgcaaatcgctcatcgaattgctggtttttcgctcggaaaagcagatattcttcga
agggctgttagtaaaaagcaagaaagtaaaatcgaagagcaaaagtctgcttttctaaaa
ggttgtatccagcaaggatatagttcatcaatggctaatgaattgtttgcatggatcgtt
cgtttttccaattatggctttaaccgaagtcatgctgtggcgtacagcattatctcttat
caacttgcctatttgaaagctcattacccacaagcattttttgcggagttactcagtgct
tctatgcaacagcatcaaaagctggcattgtattggaaagaaatgaaggaactggactta
actttactggggccttctatcaatgccagctttggaaagtacgcagtggaaggaaagcat
atccggatgggcttgctgcaaattaaagggataggaaatcaggctgttactgaaattgtc
cgcgcgcgtaaagaccgcccctttcgaaatttgttcgatttttgcttgcgtgtatcgctt
aaagtaattaaccgtcccattatcgaattactaattatggctggggcgtttgatgatcta
tataataatcgtgctagtttattagcttccattgaccaagcaatggaacaaggtgaatta
ttcggtgagtttcaagaacagggaagcttctttgccaatgatcttaagttggaaggggaa
tatgctaatatagaggattttccgcaaatcaagaagctttctcatgaaaaagaattactc
ggtatatatatatcgagccaccctgttactgcttaccgtaaattattacagcgcgcaggg
tatatatcattacaaagagcaagaaaagcggggaatggctataagcatcaaagtggctgt
gtcattcaattcattagaactattcgtactaagcgtggtgatcccatggcttttattacc
attagcgatgaaacggatgagatggaagcagtcgtctttccagaattatatcggcaagta
catcgctggtggaaagaagggatgctcgtattagtacaagggaagctagaaaacagaaat
aataggctacaaacattattgtcatctgtagaaattttaaatgaaacgaaactaggtgat
acctgccctggtcgtttatttattaaattatcaagtgaagatatagaagctgatttagcc
aagttaaaggaaatagcttttcatttcccggggaatacccctgtcattgtttttcaagaa
aggttacaacaaacatatcaattagccaatgattatgaccttcatccaagttcacgatgt
ttacaacgtctacgcgcctattttggggcggagcaagttgtcttggataagtaa
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