Virgibacillus pantothenticus: KBP50_07825
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Entry
KBP50_07825 CDS
T07430
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
vpt
Virgibacillus pantothenticus
Brite
KEGG Orthology (KO) [BR:
vpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vpt03019
]
KBP50_07825
03009 Ribosome biogenesis [BR:
vpt03009
]
KBP50_07825
Enzymes [BR:
vpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KBP50_07825
Messenger RNA biogenesis [BR:
vpt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KBP50_07825
Ribosome biogenesis [BR:
vpt03009
]
Prokaryotic type
rRNA helicases
KBP50_07825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QTY17731
LinkDB
All DBs
Position
1664722..1666032
Genome browser
AA seq
436 aa
AA seq
DB search
MNNTFQEFPFVPVMEQVIKQLEFQEPTPIQQQVIPAVLDGKSVIGQSKTGSGKSHAFLLP
LLNGIDEDKNQVQAVITAPTRELATQLYDEVKKIVRYADKEGKWTAKLLVGGTDKQKMVE
KLKQPPKIIVGTPGRILAMVKENAISIYSANSFVIDEADLMLDLGFIQEVDQLLVRCHPD
VQILVFSATIPQALQHFFKKYLQHPVHIKIADEISPETMEHRLIYLKHREEATIIAEISK
VIQPYLAIIFTNGKEKANELAASLQGKGIEAGLIHGGLSPRERKRVLKEIQNLRYQYIVA
TDLAARGIDIKGVSHVINAQFPKEEDFYIHRVGRTARAGMEGTAISIYQSEDLPLIKKLE
EKGLVFTYVDVRDGEWHAAKPWNQRSLRSKQGTDIDKEAWKRVKKAKKVKPGYKKKLQQE
KEAIKKRLSKSKYKKR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaataatacatttcaagaatttccttttgttcctgttatggaacaagtaattaaacag
ttagaatttcaagaacctacaccaatccaacagcaagttattccagctgttttagatgga
aagagcgtaattggacaatcgaaaacaggctcagggaaaagtcatgcttttttattgcca
ttgcttaatgggattgatgaggataaaaatcaagtccaagccgttataacagcaccaacg
agggaactagctacacagttatatgatgaagttaaaaagatcgttcgctatgctgataaa
gaaggaaagtggactgcaaagctgttggttggtggtaccgataaacaaaaaatggtggaa
aagctgaagcagcctcctaaaattattgtcggaactccaggcagaattttggctatggtg
aaggaaaatgccatatctatttattcagccaatagcttcgtcatagatgaagcggattta
atgcttgacttaggatttatccaagaagtggatcaactattagttcggtgtcatcctgat
gtacagatattagttttttcagctaccatcccgcaagctttacagcacttttttaaaaaa
tatttgcaacatccggtacacattaaaattgctgatgaaatttctcccgaaacgatggag
caccgtcttatttacttgaagcatagagaagaagcaacgatcatcgctgagatttcgaag
gtgatccagccttatttggctatcatctttacaaatggaaaagagaaagcaaatgaatta
gcagcttctcttcaggggaagggaatagaggcgggtctgattcatggcgggttatctcct
cgagagcgaaagcgtgtattgaaagagattcaaaatttgcgctatcaatatatagttgca
actgatctggcagcgcgtggtattgatattaaaggcgttagccacgtgattaatgcgcag
ttccctaaagaagaagacttttatattcaccgtgttggcagaacagcacgagcaggtatg
gaaggtacagcgattagcatttatcaatcggaggacttaccactcattaaaaagttggaa
gaaaagggtttagtttttacgtatgtggatgttcgtgatggagaatggcatgcagcaaag
ccttggaaccaacgttcgctccgctcaaaacaggggacggatatcgataaggaagcatgg
aaacgagtaaaaaaagccaaaaaagtaaaaccgggatataagaaaaaattgcaacaggaa
aaagaagcgattaaaaagcgattatccaaaagcaaatataaaaagaggtag
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