Virgibacillus pantothenticus: KBP50_08290
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Entry
KBP50_08290 CDS
T07430
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
vpt
Virgibacillus pantothenticus
Brite
KEGG Orthology (KO) [BR:
vpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vpt03016
]
KBP50_08290 (rnz)
Enzymes [BR:
vpt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
KBP50_08290 (rnz)
Transfer RNA biogenesis [BR:
vpt03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
KBP50_08290 (rnz)
Prokaryotic type
KBP50_08290 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Anti-Pycsar_Apyc1
Ribosomal_L32p
Motif
Other DBs
NCBI-ProteinID:
QTY17810
LinkDB
All DBs
Position
complement(1753696..1754613)
Genome browser
AA seq
305 aa
AA seq
DB search
MELIFLGTGAGVPSKERNVSAIALSLLQEQNSIWLFDCGEATQHQILHTSLKPRKINKIF
ITHMHGDHIYGLPGFLSSRSFQGGDTPLTIYGPKGLKQYVETSLALSETHLAYAISFVEV
TDQMVIEAGQFQVFVQLLEHGIPCFGYRVVEKDKPGELLVNKLKDRGIEPGPIYQEIKEN
DHVTIPHIGTIYRKDVLGEPNRGKIISLIGDTRFSKDHIRLAQNADILIHEATFGKDKQN
LAHRYFHSTTLEAAQLASESNCKHLILTHISSRYQQEANEQLLQEAREIFPNTELANDFS
RFTIT
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaattgatttttcttggtactggagctggagttccctccaaagaaagaaacgtttca
gctatagcgttatcgttattacaagaacagaatagtatttggttgtttgattgtggggaa
gcaacacagcatcaaattttgcatacaagcctgaagccacgtaagataaataaaatattt
attacacatatgcatggcgatcatatctatggcttacctggttttctaagtagtcgctct
tttcaaggaggagacacgccgttaaccatctatggtccaaagggattaaaacaatatgtc
gaaacgagcttggctttgagcgaaacacatttagcttatgccatatctttcgtggaagta
accgatcaaatggtcattgaggcagggcagtttcaagtttttgttcaattattagaacac
ggaattccgtgctttggctatcgcgtcgttgaaaaagataagccaggagaattactcgtt
aataaactaaaggatagaggaattgaaccaggccccatctatcaggaaattaaagaaaac
gaccatgtcaccatacctcacatagggactatctaccgaaaagatgtgttgggggagcca
aacagaggaaaaattatttctctgattggtgatactcgattttctaaagaccacatacgc
ttggctcaaaatgccgatatacttattcatgaagcgacctttggaaaagataaacaaaat
cttgcacaccgttacttccattctactacgttagaagcagcacaattagcgagtgaaagt
aattgtaaacatctcattttgacgcatatttcttcccgttaccagcaagaagcaaatgaa
cagctgttacaggaagcccgagaaatatttccgaatacagaattagccaacgatttttcc
agatttaccattacgtag
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