Virgibacillus pantothenticus: KBP50_15035
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Entry
KBP50_15035 CDS
T07430
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
vpt
Virgibacillus pantothenticus
Pathway
vpt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vpt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KBP50_15035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpt03000
]
KBP50_15035
Transcription factors [BR:
vpt03000
]
Prokaryotic type
Helix-turn-helix
Other families
KBP50_15035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
HTH_3
TPR_1
TPR_2
TPR_8
TPR_MalT
HTH_19
TPR_17
HTH_31
Tim44
DUF6626
Motif
Other DBs
NCBI-ProteinID:
QTY15209
LinkDB
All DBs
Position
complement(3237374..3238657)
Genome browser
AA seq
427 aa
AA seq
DB search
MNLVDIGSLIKLHRLKCKMTQEELSEGIVSLSYLSKIENQKTNASPEILQLLCNRLGIEI
SEDTDREIEEKCKEWYDMLFDKHDKKVMTEKYEELQQLMEHKINKHTIMFEIHTIRYYIV
LRDLGKALHKMNKLHDMVDSFNYEESYYWHKFKGNYYTHKEVHQEALRNYKLAEEVIRLA
NIDDKEIADLHYALSITHNYLREDLAAVDYANQAMAVFQQNYNFNRCAQCHILLGISYQR
VKDLDTAIKNYNLALHLGKLNKNENIVYLTHYNLGYLYSMMGISEEAIKHYSLAIETKDL
ADKTKLDALTHLVQELHTIGDYEKAKAYLHQAKEILELAKCKYDDFYNGYHNYMIQVYTC
LLYGDLKKFKSILTDDFIPYLKQQGDYSNLVFYAKLLATYLEEMGKYKESVEYYKLANSS
YDQLIKL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttagtggatatcggctcacttattaaattgcaccgattgaaatgcaaaatgaca
caagaagaattatcggagggcatcgtttccttgtcctatctatcaaaaatagagaatcaa
aagactaatgcaagcccagaaatcctccagttactctgtaatagattaggaattgaaatt
tcggaagatacagatagagagattgaggagaagtgcaaagaatggtatgatatgttgttt
gataagcatgataagaaggtaatgacagagaagtatgaagaattacaacagctaatggag
cataagattaataaacatacaattatgtttgaaatacatacaatccgttactatatcgtc
ttacgtgatttggggaaagctttacataaaatgaataaactgcatgatatggttgattct
tttaactatgaagaaagttattactggcataaatttaaagggaactattatacacataaa
gaagttcatcaagaagcgttgcggaattataaattggcagaagaagtaattcgtttagcc
aatatcgatgataaagaaatagctgatttgcattatgcattatcgataacccataattat
ctacgtgaagatttagcggctgtagattatgcgaatcaggcaatggcggtatttcagcaa
aactataactttaaccgctgtgcgcaatgtcatattttattaggtatatcgtatcaaagg
gtaaaagatctagatacggcaataaaaaactataatctggcattgcacttaggaaaatta
aataaaaatgaaaatatcgtttatctaacgcattataatttggggtacctttattccatg
atgggaatttcagaagaagcgattaaacattattcattagctatagaaacgaaagattta
gcagataaaactaaattagatgcacttactcatttagttcaggaacttcacacgattggt
gattatgaaaaagcaaaagcgtatttgcatcaagctaaggagatattagaattagctaaa
tgcaaatacgatgacttttacaacggatatcacaattacatgattcaagtatatacgtgt
ttactctatggcgatttaaagaagtttaaatcgatattaacagatgactttataccttac
ttaaaacaacaaggagattatagtaatttggtattttatgcgaaattgttagctacttac
ctagaggaaatggggaagtataaagagtctgttgaatattataaattagcaaatagcagt
tatgaccaattaatcaagttgtaa
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