Virgibacillus pantothenticus: KBP50_18475
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Entry
KBP50_18475 CDS
T07430
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vpt
Virgibacillus pantothenticus
Pathway
vpt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KBP50_18475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vpt03400
]
KBP50_18475
Enzymes [BR:
vpt01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KBP50_18475
DNA repair and recombination proteins [BR:
vpt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KBP50_18475
Prokaryotic type
KBP50_18475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QTY15821
LinkDB
All DBs
Position
complement(3973384..3974058)
Genome browser
AA seq
224 aa
AA seq
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MTKQILFNDWQPLLKEEFHKPYYLQLREFLKQEYTSYIIYPDMNDIFNALHYTSFEDVKV
VILGQDPYHGPNQAHGLSFSVKKGVALPPSLKNIFTEMKQDLGHPMPAHGSLESWAKQGV
LLLNNVLTVRKGQAHSHRGMGWEQFTDRVIQLLNQKNDPVVYILWGGAAQKKQALIDTGK
HYIIKSPHPSPLSAYRGFFGSKPFSKTNKLLKQLDKQPIDWRIE
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagcaaattctgtttaatgactggcagccattattaaaagaagagtttcacaag
ccctattatcttcaattgcgggagtttttgaaacaggagtatacttcttacatcatttat
ccagatatgaacgatatatttaatgcgttacactatacttcatttgaagatgtgaaagta
gttattttagggcaagacccgtatcatggtccgaatcaagctcatgggctaagcttttct
gtgaaaaagggagtcgcacttcccccgtctttaaaaaacatatttaccgaaatgaaacaa
gacttggggcatccgatgcctgcccatggctcactggaatcatgggcaaaacaaggagta
ttattgttgaataatgtacttactgttcgtaaaggtcaagcacattcacatcgaggaatg
ggatgggagcaatttaccgaccgtgtcattcagttgctaaaccagaagaatgacccagtt
gtgtatattttatggggaggagctgcacaaaaaaagcaggctcttattgatacgggtaag
cactacattatcaaatccccccacccaagccctttatcagcatatagaggattttttggc
agtaagcctttttctaaaacgaataaactattaaaacaactggataaacaaccgattgat
tggcgaattgaatag
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