Virgibacillus pantothenticus: KBP50_18845
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Entry
KBP50_18845 CDS
T07430
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
vpt
Virgibacillus pantothenticus
Brite
KEGG Orthology (KO) [BR:
vpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpt03021
]
KBP50_18845 (sigB)
Transcription machinery [BR:
vpt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KBP50_18845 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
GerE
HTH_23
RE_TdeIII
TnsD
HTH_3
HTH_28
DUF134
LppA
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
QTY15867
LinkDB
All DBs
Position
complement(4043265..4044056)
Genome browser
AA seq
263 aa
AA seq
DB search
MTTKSQPHNSGRDEVYQLIESLQKKPTDEQLQEQLVLKYKDLVESIARKYSKNSAIHEDL
VQVGMIGLLAAVRRYDSTFGKSFESFAIPTIIGEIKRFIRDKTWSVHVPRRIKELGPKIK
KAVDVLTMENQSSPSIKQIADYLQVTEEDILETMEMGKSYKALSVDRKVEADSDGSTVAI
LDLVGKEETGYEQTDQRMLLEKIFPILSEREQKILQYTYFENKSQKETGELLGISQMHVS
RLQRRSLRKLREAIQSENSEVFD
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccaaatctcaaccacacaatagcggaagagatgaggtttaccaattaattgaa
tcattgcaaaaaaagcctactgatgagcagctacaggaacaacttgtactcaaatataaa
gatcttgtagaatcaattgcacgtaaatactcgaaaaatagtgcaattcatgaagacctt
gtccaagtaggtatgatcggtttacttgctgcagtccgccggtatgattcaacgttcggt
aaatcttttgaatcttttgcgatacctactattatcggtgagataaaaagatttataaga
gataaaacatggagtgtacatgttcctagacgtattaaagaattaggtcccaaaataaaa
aaagccgtcgatgttttaacgatggaaaatcaatcttccccctccattaaacagatagca
gactatttgcaagtgacggaagaagatattttggaaacaatggaaatggggaaaagttat
aaagcactttctgtagatcggaaagtagaggcagattccgatggcagcacagttgctata
ttagatttagttggcaaagaagaaacgggatatgaacagacggatcagagaatgcttttg
gaaaaaatatttccgatattgtctgaacgtgaacagaaaatcttacaatatacctatttt
gaaaataagagccaaaaggaaactggtgaattactaggcatatcgcaaatgcatgtttca
cggttgcaacgacgttcattgcgtaaattgcgagaagcaattcagtctgagaattcggag
gtctttgattaa
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