Vibrio pomeroyi: L0992_04235
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Entry
L0992_04235 CDS
T11873
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
vpx Vibrio pomeroyi
Pathway
vpx02020
Two-component system
vpx02040
Flagellar assembly
vpx05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L0992_04235
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
L0992_04235
09142 Cell motility
02040 Flagellar assembly
L0992_04235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vpx03000
]
L0992_04235
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vpx02035
]
L0992_04235
Transcription factors [BR:
vpx03000
]
Prokaryotic type
Helix-turn-helix
Other families
L0992_04235
Bacterial motility proteins [BR:
vpx02035
]
Flagellar system
Flagellar assembly proteins
Others
L0992_04235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
bpMoxR
Mg_chelatase
AAA
AAA_7
nSTAND3
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
XGB67902
LinkDB
All DBs
Position
1:929668..931134
Genome browser
AA seq
488 aa
AA seq
DB search
MQGLAKLLVVDDNAQDRHNLSTILEFVGESCEVISSEQARKVDWSQQWAGCIIGSIKGKG
FNALLNEKLVHANHIPLLVIGKNNHPVDELTNFVGELELPLNYPQLSDALRHCKDFLGRK
GVQVVSSARKNTLFRSLVGQSAGIQEVRHLIEQVSSTEANVLILGESGTGKEVVARNIHY
HSKRRSGPFVPVNCGAIPPDLLESELFGHEKGAFTGAITARKGRFELAEGGTLFLDEIGD
MPMAMQVKLLRVLQERCFERVGGNSTIQADVRVIAATHRNLEDMIDDDSFREDLYYRLNV
FPIEMPALQDRKEDIPLLLQELMTRMEAEGSMPICFTPRAINSLMEHYWPGNVRELANLV
ERMVILYPNSLVDVNHLPTKYRYSDIPEFQPEFNSFVSEEEQERDALADLFSEDFSFDQQ
DDIADNANAPQELPPEGVNLKELLADMEVNMINQALEAQGGIVARAADMLGMRRTTLVEK
MRKYNLQR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtttggcaaaactgcttgtcgtcgacgataacgctcaagatcgtcacaattta
agcacaatattagagtttgtaggagagagctgcgaagtaatcagctctgaacaagcgcgc
aaggttgactggtcacaacagtgggccggctgcatcattggctcaattaaaggtaaaggc
ttcaacgcattactgaatgaaaagcttgttcacgccaatcacatcccactattagtgatt
ggcaaaaataatcacccggttgacgagctcactaactttgttggtgaacttgagcttcct
cttaactacccgcaattaagtgatgcattaagacactgtaaagacttcttaggccgtaag
ggtgttcaagttgtctcttcggcacgtaagaacacactgtttcgtagcctagttggtcaa
agtgctggcattcaagaagtacgtcacttaattgaacaagtctcttcgacagaagcgaat
gtattgattcttggtgaatcaggcacgggtaaagaagtcgtagcacgtaatattcattat
cattctaagcgtcgttctgggcctttcgtgccagtgaactgtggcgcaattccgccagac
ttattggaaagcgaactgttcggccatgagaagggcgcatttactggtgcgattactgca
cgtaaaggccgctttgaattggctgaaggtggcacactgtttcttgatgagattggcgat
atgccaatggcgatgcaggttaagctgctacgcgttttacaagaacgatgctttgagcgc
gtaggtggcaatagcacgattcaagctgatgttcgcgtgattgcggcaacgcaccgtaac
cttgaagacatgatcgacgatgactcgttccgtgaagatctttactaccgcttgaatgta
ttcccgattgagatgccggcgctgcaagatcgcaaagaagatattccattattgcttcaa
gagctgatgacacgaatggaagcggaaggcagcatgcctatttgctttacgcctcgcgcg
attaactctttgatggagcattactggccaggtaacgttcgtgaattagcgaacctagtt
gagcgtatggtcatcctttatcctaatagcttggttgatgtaaaccatctaccaactaag
tatcgatacagcgatattcctgagttccagcctgagtttaatagctttgtgtccgaagaa
gagcaagagcgtgatgcactggctgatttgttctcagaagatttcagctttgatcagcaa
gatgatatcgctgacaacgcgaatgcacctcaagagttaccaccagaaggggtaaacctg
aaagagctgcttgcggacatggaagtgaatatgatcaaccaagctttggaagcacagggc
ggtattgttgctcgtgcagctgacatgcttggaatgcgcagaaccactttggttgaaaaa
atgcgtaaatataacttgcagcgttag
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