Vallitalea pronyensis: HZI73_06255
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Entry
HZI73_06255 CDS
T07178
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
vpy
Vallitalea pronyensis
Pathway
vpy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vpy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HZI73_06255 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpy03021
]
HZI73_06255 (rho)
03019 Messenger RNA biogenesis [BR:
vpy03019
]
HZI73_06255 (rho)
Transcription machinery [BR:
vpy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
HZI73_06255 (rho)
Messenger RNA biogenesis [BR:
vpy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HZI73_06255 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
NACHT
AAA_22
Spore_III_AA
AAA_25
AAA_14
Mor
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QUI21929
UniProt:
A0A8J8SG21
LinkDB
All DBs
Position
1495379..1497037
Genome browser
AA seq
552 aa
AA seq
DB search
MSTDFKKMKLAELRQLGKEIGIRSITTFKKAELVQILTEIEAKKQEKQETETVVVEEKNK
QQDEKPQSKVVQAKPKEVKTKKVHVSNTKEVKPQVKQESYKQKAENKTSVEKKQPTQQKF
VNKKVEGVAEKKTEDKKKVEYNRVDDKKRAEEPEKREVVRERPAKTVPSDFQDLNSGEIA
YGVLEVLPDGFGFIRCENYLPGEDDVYVSPSQIRRFNLKTGDLIIGNIRVPKENEKFRAL
LYVQSVNGDSPANAARRPNFEDLTPIFPNERVRLETISSQYSTRLIDFVAPIGKGQRGMI
VAPPKAGKTTLLKKIANAITENQPNAHLIVLLIDERPEEVTDIRRSIHGENVEVIYSTFD
ELPDHHKRVSEMVLARAKRMVEQKKDLFILLDSITRLARAYNLTIPPSGRTLSGGLDPAA
LHMPKKFFGAARNIEEGGSLTILATALVETGSKMDEVIFEEFKGTGNMELVLDRKLSEKR
IFPAIDIAKSGTRREDLLYTREEMDAIYRLRKASSNMRSDEVIESILRVFVKSNNNGEFF
KTINSNLLEKYR
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagatttcaagaagatgaagttggctgagcttagacagttaggaaaagaaata
ggcattcgtagtataacgactttcaagaaagcagagcttgtacagattctgacagaaata
gaagcaaagaaacaagaaaaacaagagacagagactgttgtagtagaggaaaaaaataag
cagcaagacgaaaagcctcaatcaaaggttgtccaggccaaaccaaaagaagtaaaaacc
aaaaaggttcatgtatcaaataccaaagaagtaaagccacaagtgaaacaagaaagctat
aagcaaaaagctgagaacaaaacaagtgtagagaaaaagcaacccacccaacagaaattt
gtgaataaaaaggtagagggagttgctgagaagaaaacagaagacaagaaaaaagtggaa
tacaatcgtgtggacgataaaaaacgcgcagaagagccggaaaaaagagaagttgtacgt
gaacgaccagctaaaacggtaccatctgactttcaagaccttaatagtggtgaaatagcc
tacggtgttttagaggtgcttcctgatgggtttggattcattcgttgtgaaaattactta
cctggtgaagatgacgtttatgtatccccatcacaaattagaaggtttaacttaaaaaca
ggtgatttaatcattggtaacattcgtgtgcctaaagaaaatgagaaatttagggcacta
ctctatgtgcagtccgttaatggtgattcgccagctaatgcagctagaagacctaatttt
gaagaccttacaccgatatttccaaatgaaagagtgcgtctagaaaccatttcttcccaa
tattcaacaagactgattgatttcgtagcccctataggaaaaggtcaaaggggtatgatt
gttgcgccaccaaaagcaggtaaaacaaccttacttaaaaaaatagccaatgccattacg
gaaaatcagcccaatgcccatctgattgtcttattaattgatgaacggccagaagaggta
accgatattcgacgttcaatacatggtgaaaatgtagaagttatctattccacatttgat
gaattaccagatcatcataaacgtgtttcagaaatggtccttgcaagagctaagcgtatg
gtagaacagaagaaagatttatttattttattagatagtattacacgattagcacgtgca
tacaacttaaccattccaccaagtggcagaaccttatcaggaggtcttgatccggcagca
cttcatatgcctaagaaattctttggtgcagcacgaaacatcgaagaaggcggcagcctt
accatcctagcaacggctcttgttgagacaggaagtaagatggatgaagttatctttgag
gaattcaaaggtacaggtaacatggaattagtgctggatagaaaattatctgaaaaacgt
atattcccagcaatcgatattgctaaatcaggtaccagaagagaagacttactctacaca
agagaagaaatggatgccatctatcgcttacgaaaagcaagcagtaacatgcgctcagat
gaagtcattgagagtattttacgtgtatttgttaagtccaataacaatggggaattcttt
aaaaccattaatagcaatttattagagaaataccgctag
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