Vallitalea pronyensis: HZI73_06940
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Entry
HZI73_06940 CDS
T07178
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
vpy
Vallitalea pronyensis
Brite
KEGG Orthology (KO) [BR:
vpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpy03009
]
HZI73_06940 (rlmD)
Enzymes [BR:
vpy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HZI73_06940 (rlmD)
Ribosome biogenesis [BR:
vpy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HZI73_06940 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Cons_hypoth95
Methyltransf_11
PCMT
N6_N4_Mtase
PrmA
Methyltransf_32
Methyltransf_12
TRAM
Methyltrans_SAM
DOT1
RrnaAD
UPF0020
DdMyo7_FERM
FtsJ
Ubie_methyltran
TRM5-TYW2_MTfase
Methyltransf_18
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
QUI22053
UniProt:
A0A8J8MIS6
LinkDB
All DBs
Position
1649844..1651196
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AA seq
450 aa
AA seq
DB search
MKKKDVVEGLITKVNFPNKGVMDIDGEKVVVKNVIPGQTIKARITKKRRNKIEGRLLEVV
EKSSLEEDTPCPVFGQCGGCLYQSLPYEEQLKLKASQVIELLNTLNVPYEYEGITPSPHV
YHYRNKMEYSFGDAFKNGPLALGMHKRGAFHDIVTVDACKIVDEDFNTTLKTTLAYFGDK
DIPYYAKRSHEGYLRHLVVRKGTKTKEILINLVTSSQMSIDLTAWVEKVSTVPLKGEIVS
IMHTINDSVADVVKADEIRKLYGKDYFTEELLGLKFHVSAFSFFQTNSLGAEKLYSVVRD
YVGETKDKIIFDLYSGTGTITQILAPVAKKAVGVEIVEEAVEAAKQNAKLNGLDNCEFIA
GDVLKVIDSLQDKPDIIVLDPPRDGIHPKALQKIIDFGVEQIVYVSCKPTSLVRDLEVLL
ARGYQLDKVRCVDMFPHTVHVETIAKITLK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaaagatgttgttgaaggacttataacaaaagtaaacttccctaataagggt
gtgatggatatagatggtgagaaggttgttgttaagaacgtcattccagggcagacaatc
aaagccagaatcactaagaagagaagaaacaaaattgaaggacgcctactagaggtcgtg
gagaaatcatctctagaagaggatacaccttgtcctgtttttggtcagtgtggagggtgt
ctctatcaatcgctaccttatgaagaacaacttaaattaaaggcatcacaagtcattgaa
ttattaaatacacttaacgtaccttatgaatatgaaggcataacgcctagtcctcatgta
tatcattatcgcaataagatggaatatagttttggtgatgcatttaaaaatggtcctcta
gcccttggtatgcacaaaagaggcgcattccatgatattgttaccgtggatgcatgcaag
attgttgatgaagattttaataccaccttaaaaacaacacttgcttattttggtgataaa
gatataccttattatgctaaaaggtcccatgaaggttatttgcgtcatttagtcgtacgt
aaagggactaaaacaaaagagatactgattaatctcgtaacatcttctcaaatgtctatt
gatcttacagcatgggtagaaaaagtaagtactgttcccctaaagggtgagattgtatcc
atcatgcataccattaatgattctgtagccgatgtggtaaaagcagatgagattagaaaa
ctctatggcaaagattactttacggaggagttactgggcctaaaatttcacgtatccgct
ttttcgttttttcaaaccaattcattaggtgcagagaagctctactctgtagtacgtgac
tatgtgggtgagacgaaagataaaataatttttgatctctacagcggaacaggtaccatc
acccagatattagcacctgttgccaagaaggctgttggtgtagaaattgtagaagaggct
gtagaggccgctaaacagaatgctaaattaaatggacttgataactgcgaatttatagct
ggtgatgtcctaaaagtcattgattcattacaggataagcctgatattattgtactggac
ccgccaagagatggtattcatcccaaggcattgcagaagattattgattttggtgtggag
cagattgtgtatgtgtcttgtaaaccgacttctttggtgagggatcttgaagtcttgtta
gcaagagggtatcaattagataaggtgagatgtgtggatatgtttccgcacacggtacat
gtagaaactatagctaagataacactgaaataa
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