Vallitalea pronyensis: HZI73_13565
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Entry
HZI73_13565 CDS
T07178
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
vpy
Vallitalea pronyensis
Pathway
vpy02020
Two-component system
vpy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
vpy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HZI73_13565
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HZI73_13565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vpy03021
]
HZI73_13565
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vpy02035
]
HZI73_13565
Transcription machinery [BR:
vpy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HZI73_13565
Bacterial motility proteins [BR:
vpy02035
]
Flagellar system
Flagellar assembly proteins
Stator
HZI73_13565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_10
HTH_17
DUF134
HTH_Tnp_4
GerE
HTH_5
Spectrin_5
UPF0122
Sigma70_ECF
KORA
Motif
Other DBs
NCBI-ProteinID:
QUI23250
UniProt:
A0A8J8MKD2
LinkDB
All DBs
Position
3239953..3240720
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AA seq
255 aa
AA seq
DB search
MDDNCKAMLWQKYSKSPSAGLKEEIITEYAGLVKLVAGRLNMYLGNNVEYEDLVGYGVFG
LIDAIDKYNFDKGVKFETYASLRIRGAILDNIRRMDWIPRSLRKKQKQIDHATTKLENTL
GRPATDEEIAKELNITDDEYIKWMNQTKLLTLTSLEEYIEQGSELRIEPMNNSRYTQPER
VVEKHELREILTQVIENLLDNEKKVIMFYYYEELTLKEISHILGVSESRISQIHTKALKK
MKKRLGNNVELLAGF
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggatgataattgcaaagccatgttatggcaaaagtattcaaaaagcccgtcagcagga
ctaaaagaagaaatcataacagaatatgcagggcttgttaaattagttgctggcagactt
aatatgtacctaggtaacaatgtggaatacgaagacctagtaggctatggggtgtttgga
cttattgatgctattgataagtataattttgacaaaggagtcaagtttgaaacctatgcc
tcattacgaatcagaggtgccatactcgataatataagacgtatggactggattccaaga
tcccttcgtaaaaagcaaaagcaaatcgatcatgcaacgaccaagctagagaatacactg
ggtcgtcctgcaacagatgaagagattgcaaaagaacttaacattaccgatgatgaatac
ataaaatggatgaatcagaccaaattacttactttgacatctttagaggaatacattgaa
caaggaagcgaacttagaattgaacccatgaacaattctcgctatacacaaccggaaagg
gttgttgagaaacatgaattaagagaaattttgactcaagttatagaaaatttattagat
aatgaaaaaaaagtcattatgttttactattatgaggaactaacactaaaagaaataagt
catatactcggggtatcagagtcaagaatttctcaaattcatacaaaagcattaaaaaaa
atgaagaagaggctggggaataatgtagagttactggcaggtttttag
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