Vallitalea pronyensis: HZI73_13635
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Entry
HZI73_13635 CDS
T07178
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
vpy
Vallitalea pronyensis
Pathway
vpy03030
DNA replication
vpy03430
Mismatch repair
vpy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HZI73_13635
03430 Mismatch repair
HZI73_13635
03440 Homologous recombination
HZI73_13635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vpy03032
]
HZI73_13635
03400 DNA repair and recombination proteins [BR:
vpy03400
]
HZI73_13635
Enzymes [BR:
vpy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HZI73_13635
DNA replication proteins [BR:
vpy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HZI73_13635
DNA repair and recombination proteins [BR:
vpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HZI73_13635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
DNA_pol3_a_NII
DNA_pol3_a_NI
RNase_H_2
Rv2179c-like
HHH_3
DEDDh_C
tRNA_anti-codon
4_1_CTD
DUF1697
YhfH
HMBD
T2SSK
Motif
Other DBs
NCBI-ProteinID:
QUI23263
UniProt:
A0A8J8SHD3
LinkDB
All DBs
Position
3253421..3257755
Genome browser
AA seq
1444 aa
AA seq
DB search
MSRCFVDVFHDIELDESLDVYFSNATVERVVINSQDKELQVHMIFKTIVHMKFIQQVERM
LEANICEDSGLAVNIICRYEVAYDLNKIIMLYQDSILYELKQHSPVVFGILRKAELNIAE
GNITFTLKDSIDNYLYARKVDKRIEEIMKKRFDMEAKVSFIVHEEAEKNNKKFLKKRDEK
EKAFVTQVMSAMPVQTTSTTENTKKDNGGSSNHNVDERMIIGRKINGEITPIHEIDHDVD
DIIFDGIIFHVESREIRNNKYIVAFDLTNEKDSITAKCFVKKEQFEEDVKDRLVKGKAVR
VKGNLQFDTFSKEMTVMTRAIMEIHDFRIKRVDLSKEKRVELHAHTQMSDMDSVVSAKAL
VNQAIAWGHDAIAITDHGVVQAFPEAFHAAHGKIKIIYGLEAYLVDDLKSIVHQSHHQSL
DDEYVIFDLETTGFYPGKDGITEIGAVKIKNGEIIDNFSTFVNPERHIPQEVTALTGITD
EMVAEAPKFKQALPNFLTFIGDAVLVAHNADFDMRFIRYFCKEMDREVNNTVLDTLELGR
VLLTDLKNYKLNTLAKELGVKLENHHRAVDDALATAKIFMEFIHMLRNKNISNLEELETY
AHEATKNVKKLKYYHAIILAKNLVGLRNLYELVSKSHIDYFFRKPRVPKSVYLELKEGLL
IGSACEAGELYKAVLEDKPKEEIDRLVDFYDYLEIQPIMNNEFMIRNGSVESIQVLQDIN
KKIVRLAKAHNKPIVGTCDVHFLNPDDEVYRRIIMAGQGFKDADQQAPLYFRTTDEMLKE
FAYLGEEVAREVVIDNTRKIADMIENIDPVPPDKYPPIIEGSDETLRKICMDKAISIYGD
PLPEIVATRLERELHSIISNGFAVMYIISQKLVWKSIEDGYLVGSRGSVGSSFAATMSGI
TEVNPLSPHYICPNCKYSDFESEIVKKNAGNSGCDLPDKKCPKCGTDLEKEGHDIPFETF
LGFKGNKEPDIDLNFSGEYQSKAHDYTEEIFGTGYVFRAGTIGTLAEKTAYGFVKKYFDE
KEITVRNAEVNRLIGGCTGARRTTGQHPGGIIVVPRSEEIYKFTPVQRPANDMNTKIITT
HFDYHSIDHNLLKLDILGHDDPTMIRMLEDLTGVDAKLIKFDEPQVASLFTSTKALHIKP
DDIDGCPLGSLGIPEFGTDFVIQMLLDTKPKTFSELCKISVLSHGTDVWLNNAQELIRDG
KATIGEVISSRDDIMVYLINMGVEKELSFTIMESVRKGKGLKPEWEEAMLDQGVPEWYIW
SCKQIKYMFPKAHAVAYVMMAYRIAYFKVYYPEAYYAAYFSIRASDFDYELMCHGKQKVD
GHINDYKSRLNDLSKKEKDTLKDMRIVQEMYARGIQFVPIDLYQVKAKLFQVLEAGIMPS
LSAIQGLGDKAAENIVNARENGTFLSIDELRQRTKISKTVIEIMKQNKILDGMPESNQLS
LFEV
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgagcagatgcttcgtagatgtatttcatgacatagagcttgatgagagtttggatgtt
tattttagtaatgccacagtagagcgtgtggtgattaactctcaggataaagaattacaa
gttcatatgatatttaaaaccattgttcatatgaagtttatacagcaagttgaacgtatg
ttagaagccaatatatgtgaggattcaggtctagctgtcaatattatatgccgatatgag
gtggcctatgatctaaataagatcatcatgttgtatcaagatagtattttatatgaattg
aaacagcatagccctgtagtttttggtattttgagaaaggcagagctaaatattgcagag
ggaaacattacctttaccttaaaagatagtattgataattatctctatgccagaaaagtg
gataaacgcattgaggagatcatgaaaaaacgtttcgatatggaagcgaaagtatctttt
atcgtacatgaagaagctgaaaagaataacaaaaagttccttaaaaagcgggatgaaaaa
gaaaaagcgtttgtcacacaagtgatgagtgcgatgccagtccaaaccacatccacaact
gagaacaccaagaaggataatggcggttccagtaaccataacgtggatgagcgtatgatt
attggtcgaaaaatcaacggtgaaattacgcctattcatgagattgaccatgacgtggat
gatataatatttgatggtattatttttcatgttgaaagtcgggagattcggaacaataag
tacattgttgctttcgatttaaccaatgagaaggattccattacagctaagtgttttgtt
aagaaagagcagttcgaagaagatgtaaaggatcgtttagtaaaaggtaaggctgttcgg
gtaaaagggaacttgcagtttgataccttctccaaagagatgacagtcatgacccgtgcc
attatggaaatccatgattttcgcattaaaagagtggaccttagtaaagaaaaacgtgtg
gaactgcatgcgcatacccaaatgagtgatatggacagtgttgtcagtgcaaaagcactg
gttaatcaggctattgcatgggggcatgatgccattgctattacggaccatggtgttgtt
caagcctttccagaagcctttcatgcagctcatggaaagataaagatcatttatggttta
gaagcttatttagtagatgatttgaagtccattgttcaccaatcccatcatcaaagttta
gatgatgaatatgttatttttgatttggagaccacaggtttttatccaggcaaagatggc
ataactgagattggtgctgtgaagattaagaacggtgaaatcattgacaattttagtacc
tttgttaatccagaaaggcatataccccaagaagtaactgctttaacaggcataaccgat
gagatggtagctgaggcgcctaaatttaagcaagcactgcctaattttttaacatttatt
ggtgatgccgttctcgtagcccacaacgcagattttgatatgcgtttcatacgctatttt
tgtaaagagatggatagagaagttaacaacaccgtattagatactttagaacttggcagg
gttttattaacagatttaaagaattataaattgaataccctggccaaagaattaggggtt
aagcttgaaaatcaccatcgtgctgttgacgatgcgttagcaacagccaagatatttatg
gaatttatacatatgttaaggaataaaaacataagtaacctagaagaacttgaaacatac
gcccatgaagccactaaaaatgtgaagaaactgaaatactatcatgctattatattagct
aaaaatttagtgggtctacgcaatctctatgagcttgtatctaaatcccatattgactat
ttcttccgaaaacctagggtgcctaaaagtgtataccttgagttaaaagaagggctgttg
attggttcagcttgtgaggcaggggaattatacaaggctgtattagaggataaaccaaaa
gaggaaattgacagattggtggatttctacgattatcttgaaattcaacccatcatgaat
aatgaattcatgattagaaacggttctgtagaaagtatacaagtacttcaagacattaac
aagaaaattgtacgcttagccaaggcacataacaaacccatcgttgggacatgtgatgta
cactttcttaatcctgatgatgaagtttatcgtcgtatcattatggcaggtcaaggtttc
aaagatgccgatcaacaagcacctttgtactttagaaccaccgatgaaatgttaaaggag
tttgcttatctgggagaagaagtagcgcgagaggttgttattgacaatacacgcaagata
gcagatatgattgaaaacattgatccagtaccacctgataagtatccacccattatagaa
ggttcagacgaaacattgcgtaaaatctgcatggataaagccatatccatttatggtgac
ccattgccggaaattgtagcaacgcgcctagagagagagctccattcaattatttccaat
ggttttgctgtgatgtatattatttcacagaaattggtgtggaaatccattgaagatggt
tatttggttggttcaaggggctctgttggttcttcttttgcggctaccatgtcgggtata
acggaagttaatcccttgtcgccacattatatctgccctaactgtaagtattccgatttt
gaatcagaaatcgttaaaaagaatgcaggtaattctggctgtgatctaccagataagaaa
tgcccaaagtgtggtacagatcttgaaaaagaaggtcacgatatcccctttgaaacgttt
cttggatttaagggcaacaaagagcctgatattgaccttaacttctctggtgaatatcag
agtaaggcccatgattacacagaagagatttttggcacgggctatgtattcagagctgga
acaattggtactttggctgagaaaacagcatatggttttgtaaagaagtatttcgatgaa
aaagagataaccgtgcgtaatgcagaggttaaccgccttataggaggttgtactggtgcc
agacgaacaacaggtcaacatcccggtggtattattgttgtacctaggagtgaagaaatc
tataaatttacaccggttcagcggccggctaacgatatgaataccaagattatcaccaca
cattttgactatcactccatcgatcacaaccttttgaagctggatatactgggtcatgac
gaccctaccatgattcggatgctggaagatttaacaggtgttgatgctaagcttatcaag
tttgatgaaccccaagtggcatctttatttacaagcaccaaagcactccatattaaaccc
gatgatattgatggttgtcctctagggtccttaggcattcctgagttcggtacagatttt
gttatacagatgcttcttgataccaaaccaaaaacattttcagaattatgtaagatatcc
gtgctgtctcatggtacagatgtatggcttaacaatgctcaggagcttattcgagatggc
aaagccaccattggtgaagttatatcatcccgggacgatatcatggtatacctgattaac
atgggtgtggaaaaagaattgtcttttaccatcatggaaagtgttcgtaaaggtaaaggc
ttaaagccagagtgggaagaggctatgctggatcaaggtgtaccagaatggtatatttgg
tcttgtaaacaaatcaaatacatgtttccaaaagcacatgctgtagcatacgttatgatg
gcatatcgtattgcctattttaaggtctactatccagaagcctactatgcagcctatttt
agcatacgtgcttcggattttgattatgaattgatgtgtcacggaaagcaaaaggtggat
ggtcatattaacgattacaagagtcgactaaatgacttatcaaaaaaagagaaagatacc
ctaaaagatatgcgtattgtacaagaaatgtatgcaagagggatacagtttgtacccatt
gatttgtatcaagtaaaagcaaaattattccaagtcctggaagctggtattatgccatcc
ctaagtgcaatccaaggtttaggtgataaagctgctgagaatattgttaatgccagagaa
aatggtactttcttatccattgatgaactgcggcaacgcaccaaaatcagtaaaacggtt
attgaaattatgaagcaaaataaaattctagatggcatgccagaatcaaatcaacttagt
ttatttgaagtatag
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