Vallitalea pronyensis: HZI73_25375
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Entry
HZI73_25375 CDS
T07178
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
vpy
Vallitalea pronyensis
Brite
KEGG Orthology (KO) [BR:
vpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpy03009
]
HZI73_25375 (rlmD)
Enzymes [BR:
vpy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HZI73_25375 (rlmD)
Ribosome biogenesis [BR:
vpy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HZI73_25375 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_11
MTS
TRM5-TYW2_MTfase
PrmA
Methyltransf_12
UPF0020
N6_Mtase
Methyltransf_4
FUT8_N_cat
RrnaAD
N6_N4_Mtase
NodS
PCMT
TPMT
Motif
Other DBs
NCBI-ProteinID:
QUI25421
UniProt:
A0A8J8SJ92
LinkDB
All DBs
Position
complement(6094815..6096224)
Genome browser
AA seq
469 aa
AA seq
DB search
MKKNNQALPVVKNEYYHMTIDDLGIHGEGIGKINGYTLFVDGALPGEKVKVKVIKTKKNY
GYGKLIEIVKPSEHRRDPVCPIAKRCGGCQIQHLSYKAQLAYKRKKIVDLLERIGGMKDV
VVNETIGMDDPYYYRNKVQFPVGEAMDGGIDIGFYAMRSHQIVTTDTCYIQQPVNGTIIE
TIKAHMLTYGIPPYSEHRHQGLVRHIVTRISHHTNEIMVGIVINGHKLPHEEELVTSLQQ
IEQVSGIYVSMNKEKTNVIMGKTIRMLWGQETITDYIGAIAFRISPLSFYQVNPIQTEKL
YNMVLAYADLTGEEVVWDAYCGIGTISLFLAKHCKKVLGVEIVPEAIQDAKENARLSGIT
NAEFHVGKAERVITEQFQDGVKADVIVVDPPRKGCDKELLDTIIAMEPKRVVYVSCDPGT
MARDVRVLCDGGYAVREVQGVDMFPHTVHTETICLLKNSKSSDYLYIDN
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaataatcaagcattacctgttgtaaaaaatgaatattaccacatgaccatt
gatgatttgggtattcatggtgaaggtattggtaaaataaacggctataccctatttgtt
gatggtgccttaccaggagaaaaggttaaagtaaaagtcattaaaaccaaaaaaaattat
ggttatggtaaacttatagaaattgtaaaaccttcagaacatcgaagggacccagtatgt
cccattgcaaagcgttgcggcgggtgtcagatacaacatctctcttacaaggctcaattg
gcatataagcgaaaaaagattgtagacctgttagagcgtatcggtggtatgaaagatgtg
gttgtcaacgagaccataggtatggacgacccttactattatcgcaataaagtgcaattt
cccgttggtgaggcaatggatgggggtatagatattggtttttatgccatgcgcagccat
cagattgtcacaacggatacatgttatattcaacagcctgttaatgggaccattatagaa
accataaaagcccatatgttgacttatggcattccaccttatagtgaacatcgtcatcaa
gggcttgttcgacatattgttacaagaataagccatcataccaatgaaatcatggtaggt
atcgttataaatggtcataagttgcctcatgaagaagagcttgttaccagcttacaacag
attgagcaggtatcaggtatctatgtgagtatgaataaagagaaaactaatgtgattatg
ggcaaaaccattaggatgttatggggccaagaaaccataacggattatatcggtgctatt
gcttttcggatatcaccattatccttctatcaagtaaatccgatacaaacggagaaactc
tataacatggttttagcgtatgccgatttaactggcgaagaagttgtgtgggatgcttat
tgtggtattggtaccatatccttattcttagcaaagcattgcaaaaaggttctaggagtg
gagatcgtgccagaagccatccaagatgctaaggagaatgccagacttagtggtatcacc
aatgcagaattccatgtgggaaaagctgaacgagtgattacggagcaattccaagatggt
gtgaaagcagatgttatcgtagtggatcctcctagaaaggggtgcgataaagagttgttg
gatacgattatagctatggagccaaagcgtgtggtgtatgtgtcttgtgatcctgggact
atggcaagggatgtgagggttttgtgtgatggtggatatgcggttagggaagtgcagggg
gttgatatgtttccgcatacggtgcatacagaaactatctgccttttgaagaacagtaaa
tcgtcagattacttgtatatagacaattag
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