Vibrio qinghaiensis: CCZ37_01180
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Entry
CCZ37_01180 CDS
T05259
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
vqi
Vibrio qinghaiensis
Pathway
vqi02024
Quorum sensing
vqi03018
RNA degradation
vqi05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCZ37_01180
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CCZ37_01180
05111 Biofilm formation - Vibrio cholerae
CCZ37_01180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vqi03019
]
CCZ37_01180
03036 Chromosome and associated proteins [BR:
vqi03036
]
CCZ37_01180
Messenger RNA biogenesis [BR:
vqi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CCZ37_01180
Chromosome and associated proteins [BR:
vqi03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CCZ37_01180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ASU21307
UniProt:
A0A223MVF5
LinkDB
All DBs
Position
1:236026..236292
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AA seq
88 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVNQMVYKHAIS
TVVPARAVSHHTAEPRTGSDRPSDKSEE
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctctacaagacccattcttaaatgcactacgtcgtgagcgcatt
ccagtatccatctaccttgtgaacggaattaagcttcaaggtcagattgaatcctttgat
caatttgtgatcttactgaaaaacacagtcaatcaaatggtgtataagcatgcgatttca
acggttgttcctgcacgtgcagtgagccaccacactgctgagccacgcaccgggtctgat
cgtccatcagacaaatcagaagagtaa
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