Vibrio qinghaiensis: CCZ37_01585
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Entry
CCZ37_01585 CDS
T05259
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
vqi
Vibrio qinghaiensis
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vqi03019
]
CCZ37_01585
03009 Ribosome biogenesis [BR:
vqi03009
]
CCZ37_01585
Messenger RNA biogenesis [BR:
vqi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CCZ37_01585
Ribosome biogenesis [BR:
vqi03009
]
Prokaryotic type
rRNA processing factors
CCZ37_01585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ASU21372
UniProt:
A0A223MUV9
LinkDB
All DBs
Position
1:317869..319338
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AA seq
489 aa
AA seq
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MSAELLLNVTPSETRVAMIEGGVLQEVHIEREAKRGIVGNIYKGKVSRVLPGMQAAFVDI
GLDKAAFLHASDIVPHTECVAENEKQQFQVRDISELVRQGQDIVVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIESESERDRLKKVVSHYCDEHGGFIIRTAAEGADEK
ELAQDAAFLKRLWLKVLERRVKYKTRSTLYGELGLAQRILRDFVGTDLTRILVDSRLEFE
NLKEFTSEFVPELTDKLELYEGDKPIFDMYDTENEVQRSLERKVELKSGGYLIIDQTEAM
TTIDINTGAFVGRRNLEETIFNTNVEATQAIARQLRLRNLGGIIIIDFIDMMSEEHRKRV
LNSLDAALVKDRVKTNINGFTQLGLVEMTRKRTRESIEHVLCSSCPTCEGRGSVKTVETV
CFEILREITRVNRAYDADKFVVYASPAVAETLQGDESHALAELEVFIGKEVRIQAEPLYI
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagagttgctactaaacgtcaccccgagtgaaactcgtgtggcgatgattgaa
ggcggagttcttcaagaggtccacattgaacgagaagcgaaacgcggcattgtgggcaat
atttacaaaggaaaagtcagccgagttcttcccggaatgcaggccgcctttgtcgatatt
ggtttagacaaggccgcttttcttcacgcttctgacattgttcctcatactgaatgtgtg
gctgagaacgaaaagcagcagtttcaagttcgtgatatttcagagctagttcgtcaaggc
caagatattgtggtgcaagtggtcaaagatccattaggcactaaaggcgcccgtttaacg
acagatattaccctaccttcgcgctatctcgtttttatgcccggcgcaagtcatgttggt
gtctcacaacgcattgaaagtgaatcagagcgtgatcgtctcaaaaaagtcgtgtctcat
tattgtgatgagcacggtgggttcattattcgtaccgccgctgaaggggctgatgagaaa
gagcttgcacaagatgccgcctttcttaaacggctatggctgaaagtgttggagcgtcga
gttaaatacaaaacacgctcgacactgtatggcgaattgggtttagctcagcgtatttta
cgagattttgtcggcactgatttgacacggatcttagtcgattcacgccttgaatttgag
aacctcaaagagttcacctcagagtttgtgcctgagttaaccgacaagcttgaactgtat
gaaggtgacaagcctatttttgatatgtacgacaccgaaaacgaggttcagcgttctctc
gagcgtaaagtggagctcaagtctggtggataccttatcatcgaccaaaccgaagccatg
accacaattgatatcaatactggcgcgtttgttggccgtcgtaacctcgaagaaaccatt
tttaatactaatgtggaagcgacccaagccattgcccgtcagttacgtttgcgcaactta
gggggcatcatcattattgattttatcgatatgatgtctgaagagcaccgtaagcgagtg
ctcaactcgttagatgccgctctggttaaagatcgcgtcaaaacgaatattaatggtttt
acgcagttaggcttggtcgagatgacgcgtaagcgcacccgtgaaagtattgaacacgtg
ttatgttcgagttgtccaacctgtgaaggccgcggcagtgtgaaaaccgttgaaaccgtc
tgtttcgaaatcttacgtgaaatcacgcgtgtcaaccgcgcttacgatgcggataaattt
gtggtttacgcatcccctgcggtggcagaaaccttgcaaggtgatgagtctcatgctctt
gctgagttggaagtgtttattggaaaagaagtgcgtatccaagcggagccactttatatt
caagaacaatttgacgttgtgatgatgtag
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