Vibrio qinghaiensis: CCZ37_02185
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Entry
CCZ37_02185 CDS
T05259
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vqi
Vibrio qinghaiensis
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vqi03016
]
CCZ37_02185
Enzymes [BR:
vqi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CCZ37_02185
Transfer RNA biogenesis [BR:
vqi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CCZ37_02185
Prokaryotic type
CCZ37_02185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ASU21476
UniProt:
A0A223MVB9
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All DBs
Position
1:434878..435975
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AA seq
365 aa
AA seq
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MRRCFYYYRQLASATDENMSDILSSLAYLCGKPAAKAKIKAKPEHFKVIEDLGFELAGSG
EHLMVHIRKTGENTSFVVNELAKACGVKSKDVSWAGLKDRHAVTQQWLSVHLPKGETPDF
TEFLAQYPSIEILETTRHNKKLRPGDLVGNHFEITLSEVTDTAEVVTRLEHIATHGVPNY
FGSQRFGNHGNNLSEARRWGKENVRSRNQNQRSLYLSAARSWIFNQIVSARIEQDKLHQF
IEGDIALEGEKTTLVTLANLTDLNNKLALNEVQISAALAGDNALPTQGEALDLEQVHLDA
EPDLMALIRSNRMRHERRALMLKPQNLSWTVEQDNVTLRFDLDAGSFATSVIRELVEEIA
VEREF
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgctgtttttattattaccgccaactcgcgtcagcgacggatgaaaacatgtca
gatatattatcttcattggcttacctttgtggtaaaccagccgctaaagccaaaataaaa
gccaagccagagcactttaaagtgattgaagacttaggattcgaactggcaggaagtggt
gaacacttaatggttcatattcgtaaaactggtgaaaataccagttttgtggtcaatgaa
ttggctaaagcatgtggtgtgaaatcaaaagatgtgagttgggctggtctgaaagatcgt
catgcggttacgcagcagtggcttagtgtacatttaccaaaaggtgagacgccagatttc
accgagtttttggctcaatatccgagcatcgaaattctggaaactacgcgtcacaataaa
aagttgcgccccggagatttagtcggcaatcattttgaaatcacgctttctgaagtcacc
gacaccgccgaagtcgtgacgcgattagagcacatcgccacgcacggtgtgcctaattat
tttggtagccaacgttttggcaatcacggcaataacctcagtgaagcgcgtcgctgggga
aaagagaacgtgcgttcacgtaaccaaaatcagcgcagtttgtatctctcggcggcccgt
tcgtggattttcaaccaaattgtctctgcccgtatcgagcaagataagttacaccaattt
atcgaaggagatatcgcacttgagggagagaaaacgaccttagtcaccttggcgaatctt
accgatctcaataacaaactggcattgaatgaagtgcaaataagtgctgctttggcgggc
gataatgcactaccgacgcaaggcgaggctttagatttagaacaagttcaccttgatgct
gaacctgacttgatggcactgatccgcagtaatcgtatgcgtcatgagcgccgggcgctg
atgcttaagccgcagaatctttcttggacagttgagcaagacaatgtgacgttacgtttt
gatttagatgcaggaagttttgctacctcagtcattcgtgaattggttgaagagatagcg
gttgaacgcgagttctaa
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