Vibrio qinghaiensis: CCZ37_02830
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Entry
CCZ37_02830 CDS
T05259
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vqi
Vibrio qinghaiensis
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vqi03016
]
CCZ37_02830
Enzymes [BR:
vqi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CCZ37_02830
Transfer RNA biogenesis [BR:
vqi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CCZ37_02830
Prokaryotic type
CCZ37_02830
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
ASU21590
UniProt:
A0A223MVH4
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All DBs
Position
1:579433..580383
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AA seq
316 aa
AA seq
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MARRRKGRPINGVILLDKPTGISSNDALQKVKRIYFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTNTSDSDGEVVETRPVNVQLNTLRECIERFRGETDQ
IPSMFSALKYQGRPLYEYAREGIDIPRESRKITVYEIELIRFEDDEVEMDVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTAVAKYPYEKMVTLEQLDALLQQALRDDVAPKNVLDSLL
MPMDSAVQDLPEVNLIPELADMVQHGQPVQVLGVPLDGTVRMTMGEEKLFIGVGEIDQDG
RVAPKRLVVFRDEESL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcgtaaaggtcgcccaattaacggggtaattttactggataagccaacg
ggtatctcctcgaatgatgccttacaaaaagtaaaacgtatttattttgcagaaaaagcc
ggacacactggcgcgctcgatcctttggcaacaggaatgttgcctatttgccttggtgaa
gcgacaaaattctctcagtttttacttgattcagataagcgttatcgagtcattgcaaaa
ttgggtgagcgaaccaatacctctgattcagacggagaggtagtggaaacacgccctgtc
aatgtgcaattaaataccctgcgagagtgtatcgagcgttttcgtggtgaaaccgaccaa
attccgtcaatgttttctgcactgaaatatcaaggccgtcctctatatgaatacgctcgt
gaaggcattgatattccgcgcgagtctcgaaaaatcactgtctatgaaattgaattgatc
cgtttcgaagatgatgaagttgaaatggatgtgcactgttcgaaaggcacttatatccgc
actatcgtggatgacttaggtgaaatgcttggttgtggtgcacatgtgaccatgctgcgt
cgtactgcggtcgcgaagtacccatatgagaagatggtgactttagagcaacttgatgca
ttgctgcaacaggcgctgcgtgatgatgtcgcaccgaaaaatgtgctggactcgttattg
atgccaatggacagtgcggtgcaagatttgccggaagttaaccttattcctgagttggca
gacatggtacaacatggccaaccagtgcaagtgttgggtgtgccacttgatggcacagtg
cgcatgaccatgggtgaagagaaactctttatcggtgtgggtgaaattgaccaagatggt
cgtgttgcacctaagcgattggtcgtttttagagacgaagagtcgctgtaa
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