Vibrio qinghaiensis: CCZ37_02840
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Entry
CCZ37_02840 CDS
T05259
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vqi
Vibrio qinghaiensis
Pathway
vqi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCZ37_02840 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vqi03019
]
CCZ37_02840 (pnp)
03016 Transfer RNA biogenesis [BR:
vqi03016
]
CCZ37_02840 (pnp)
Enzymes [BR:
vqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CCZ37_02840 (pnp)
Messenger RNA biogenesis [BR:
vqi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CCZ37_02840 (pnp)
Transfer RNA biogenesis [BR:
vqi03016
]
Prokaryotic type
tRNA degradation factors
CCZ37_02840 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
S1_RRP5
KH_2
KH_SLS1_2
aRib
DUF3016
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
ASU21592
UniProt:
A0A223MVI5
LinkDB
All DBs
Position
1:581079..583205
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AA seq
708 aa
AA seq
DB search
MFDKPVVKSFQYGNHTVTLETGVIARQATSAVMVTMNDTAVFVSVVGKKEAVEGQDFFPL
TVNYQERTYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRPLFPNAFKNEVQVIATVMS
VNPDVQPDIVTMIGTSAALAISGIPFNGPIGAARVGHIDGQLVLNPSMTELAISRLDLVV
AGTDNAVLMVESEADNLTEEEMLAAVVYGHDQQQAVIKAINEFAAEVATPAWDWVAPQEN
TVLNSKIAELAEAKLVEAYKITEKMARYDRIHEIAAEVNKVILAEDPEANAKEIHTIFHD
LEKTVVRRSIIAGNPRIDGREKDMVRALDVRTGILPRTHGSALFTRGETQAIVTATLGTQ
RDAQIIDELTGERKDNFLLHYNFPPYCVGETGFVGSPKRREIGHGKLAKRGIAAVMPSVE
EFPYTVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKSSVAGIAMGLVKEGDDFVVLS
DILGDEDHLGDMDFKVAGTNQGITALQMDIKIEGITKEIMQIALNQAQGARKHILSVMDQ
AISGARAEISEFAPRIYTMKISSEKIKDVIGKGGAVIRALTEETGTTIEIEDDGTIKIAA
TDSAQAKEAIRRIEEITAEVEVGAIYTGKVARLADFGAFVNILPGKDGLVHISQIADQRI
EKVSDYLKEGQEVQVKVLEIDRQGRVRLSMKEAVEKPAEEVVAAPTAE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataaaccagtagtgaaatcattccaatacggtaatcataccgtcactctagaa
accggcgttatcgcacgccaagctacatcggccgttatggtcactatgaacgataccgcg
gtattcgtgtctgttgttggtaaaaaagaagcagtagaaggccaagacttcttcccgctt
accgttaactaccaagagcgtacttacgccgcgggtaaaattccaggtggcttcttcaag
cgtgaaggtcgtccatcagaaggcgaaacgttgactgcgcgtctgattgaccgcccaatt
cgtcctcttttccctaatgcatttaaaaatgaagttcaagtcatcgcgacagtgatgtct
gtaaacccagacgttcaacctgatatcgtgactatgattggtacttcagcagcacttgct
atctctggcattccattcaatggtcctattggcgcggcacgcgtaggtcacattgatggt
caattagtgcttaacccaagcatgaccgagcttgctatatctcgtcttgatcttgtggtt
gcaggtacagacaacgcggtactgatggttgagtcagaagcggataacctaactgaagaa
gaaatgctagcagcggttgtttacggccacgaccaacaacaagctgtgattaaagcgatc
aatgaatttgctgctgaagttgccactccagcttgggattgggttgctcctcaagagaac
acagtacttaacagcaagatcgctgaactagcagaagctaagcttgttgaagcttacaaa
atcactgagaaaatggctcgttacgaccgtattcatgaaattgctgctgaagtaaacaaa
gtgattcttgctgaagatcctgaagcaaatgcgaaagaaatccacactatcttccacgat
ctagagaagacggttgtacgtcgtagcatcattgctggcaacccacgtattgacggtcgt
gaaaaagacatggttcgtgcgctagacgtacgcactggtattcttcctcgtactcacggt
tctgcactatttactcgtggtgaaactcaggcaatcgtaaccgctactcttggtactcag
cgtgatgctcaaatcatcgatgagctaacaggtgagcgtaaagataacttcctactacac
tacaacttccctccatactgtgtgggcgaaactggttttgtaggctctcctaagcgtcgt
gaaatcggccacggtaaactggctaagcgtggtatcgctgccgttatgccttcagtggaa
gagttcccatacacagttcgtgtcgtatcagaaatcacagaatctaacggttcatcttca
atggcttcggtatgtggcacttctcttgctctgatggatgcaggtgtaccaatcaagtct
tctgttgcaggtattgcaatgggtcttgttaaagaaggcgatgatttcgttgttctttct
gacattcttggtgatgaagatcacctaggtgacatggactttaaagtagcgggtactaac
caaggtatcactgcactgcaaatggacattaagatcgaaggtatcaccaaagagatcatg
caaattgcgctaaaccaagcacaaggtgcacgtaagcatatcctttctgtgatggatcaa
gcgatctctggtgctcgtgctgagatttctgaatttgcaccacgcatttacaccatgaag
atcagctctgagaaaatcaaagacgtgatcggtaaaggtggtgcggtgatccgtgctcta
actgaagagacgggcacaaccatcgaaatcgaagatgacggcacaatcaagattgcggca
accgatagcgctcaagctaaagaagcgattcgtcgcattgaagagatcacggctgaagtt
gaagtcggcgctatctatactggtaaggtcgctcgtctggctgattttggcgcgttcgtt
aacattcttcctggtaaagatggtctggtacacatttctcaaatcgcggatcaacgcatc
gagaaagtgtctgattacttgaaagaaggccaagaagttcaagttaaagtacttgaaatc
gaccgccaaggccgtgttcgtctaagcatgaaagaagcggtagagaaaccagcagaagaa
gttgtagcagcaccaacggctgaataa
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