Vibrio qinghaiensis: CCZ37_04065
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Entry
CCZ37_04065 CDS
T05259
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
vqi
Vibrio qinghaiensis
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vqi03016
]
CCZ37_04065
Enzymes [BR:
vqi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CCZ37_04065
Transfer RNA biogenesis [BR:
vqi03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CCZ37_04065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ASU21815
UniProt:
A0A223MW53
LinkDB
All DBs
Position
1:complement(847242..848666)
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AA seq
474 aa
AA seq
DB search
MSKKLLIKTWGCQMNEYDSSKMADLLNAANGYELTEEPEEADVLLLNTCSIREKAQEKVF
HQLGRWKTLKDKKPGVVIGVGGCVATQEGDHIRERAPFVDVIFGPQTLHRLPEMIKQSQT
NDAPVMDISFPEIEKFDRLPEPKADGATAFVSIMEGCSKYCTYCVVPYTRGEEVSRPMDD
VLYEIAQLAAQGVREVNLLGQNVNAYRGPMHDGEICSFANLLRLVASIDGIDRIRFTTSH
PLEFTDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPEI
QISSDFIVGFPGETDKDFQDTMKLIKDVDFDMSFSFIFSPRPGTPAADYPCDLSEDAKKE
RLYELQQTINAQAMRYSRLMLGTEQRVLVEGPSKKNLMELRARTENNRVVNFEGSADLIG
QFVDVKIVDVFANSLRGELVRTEQEMDLRTVISPTQMMAKTRRENELGVATFTP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagaaactgctaattaaaacctggggctgccagatgaacgaatacgattcatca
aaaatggccgacctgcttaacgctgcaaacggctacgagctaacggaagagccagaggaa
gcagatgtattattacttaacacctgttcgatccgtgaaaaagcacaagagaaagtcttt
catcagctaggtcgctggaaaacattgaaagataaaaaaccaggcgtcgtgattggcgtt
ggcggctgtgttgcaacccaagaaggtgatcacattcgtgaacgcgctccctttgttgat
gttatttttggcccgcaaaccctacaccgcttgccagaaatgataaaacaatcgcaaacc
aacgatgcgccagtcatggacatttcgttcccagagattgaaaaattcgaccgtttacca
gaaccaaaagcagacggcgcaaccgcattcgtctctattatggaagggtgttcaaaatac
tgcacttactgcgtagtaccttacactcgtggtgaagaagtcagtcgcccgatggatgat
gtgttgtatgaaatcgcgcaactcgcggcgcaaggtgtgcgcgaagtcaatcttttgggg
caaaatgttaacgcataccgtggccctatgcacgatggtgaaatctgttcatttgccaat
ctgctgcgcttagtcgcctccattgatggcattgatcgcattcgattcaccaccagccat
ccacttgaatttaccgacgatatcattgccgtttatgaagacacacctgaactggtgagt
ttcctgcatcttccggtacaaagtgggtcagatcgaatcttaaccatgatgaagcgccca
cacaccgcgattgagtacaaatcgattattcgcaaactgcgtaaggcacgcccagagatc
caaatcagttctgattttattgtcggtttccccggtgaaacagataaagactttcaagat
acaatgaagctgattaaagacgttgattttgatatgagcttcagctttatcttctcccct
cgcccgggtacgccagccgctgattacccatgtgatttatcagaagacgccaaaaaagag
cgtttatatgaactgcaacaaacgatcaacgcacaagcgatgcgttactcacgtttgatg
ttaggtacagaacaacgcgtattagtcgaaggcccatctaagaaaaatctcatggagctt
cgcgcccgtaccgaaaataaccgtgtcgttaactttgaaggctccgccgatctgattggc
caatttgtcgatgtgaaaattgtcgatgtgtttgccaactcactgcgtggtgaactcgtt
cgcactgaacaagagatggatcttcgcaccgtgatttcaccaacgcaaatgatggcgaaa
acacgtcgagaaaatgagctaggggtagccacttttacaccttag
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