Vibrio qinghaiensis: CCZ37_04225
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Entry
CCZ37_04225 CDS
T05259
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
vqi
Vibrio qinghaiensis
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vqi03016
]
CCZ37_04225
Enzymes [BR:
vqi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CCZ37_04225
Transfer RNA biogenesis [BR:
vqi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CCZ37_04225
Prokaryotic type
CCZ37_04225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ASU23530
UniProt:
A0A223N1F0
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All DBs
Position
1:888801..889595
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AA seq
264 aa
AA seq
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MRIALGIEYNGSQYYGWQRQRDVKSVQEELEKALTVVANHPVEVLCAGRTDAGVHGTGQV
IHFDTTACRKMVAWTMGVNAHLPKDIAVRWATEVSSDFHARFSATARRYRYIIYNHAYRP
GILSSGVSHYHGDLDVEKMQQAGQLLLGENDFTSFRAVHCQSNSPWRNVMHLNVTRHGHY
VVIDIKANAFVHHMVRNITGSLIVVGRGEQPPEWIKWLLEAKDRKLAGATAKAEGLYLVA
VDYPEEFSLPKESLGPLFLADHLS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcgctttaggtattgagtacaatggttctcaatactatggttggcagcgacaa
cgtgacgttaaaagtgtccaagaagaattagaaaaagcactcacagttgtggcgaaccat
ccggttgaagtattgtgtgcggggcgcaccgatgcaggggttcacggcacagggcaggtg
atacattttgatactacggcttgccgaaaaatggtcgcttggacaatgggtgtcaatgct
catttaccaaaagatatcgctgttcgttgggcaactgaggtttcaagcgattttcacgct
cgcttttcggctacagcacgccgttatcgctacatcatttataatcatgcttatcgccct
ggcatattatcttcaggtgtcagtcattatcatggcgatttagacgttgagaaaatgcag
caagcagggcagcttttattgggcgaaaatgatttcacctcttttcgcgctgtgcattgt
caatctaatagtccttggcgaaacgtcatgcatttgaatgtgactcgccatggccactat
gtcgtcatcgacattaaagccaacgcctttgtccatcatatggtgagaaatatcactggt
agcctcattgtcgtcggccggggtgagcagcctcccgaatggataaaatggctgcttgaa
gccaaagatagaaaactggcaggagcaacagccaaagccgaaggactatatttggttgct
gttgattatccagaagaattttctttacccaaagaatcgcttggtccactatttttagct
gatcatttgagctga
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