Vibrio qinghaiensis: CCZ37_04960
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Entry
CCZ37_04960 CDS
T05259
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
vqi
Vibrio qinghaiensis
Pathway
vqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CCZ37_04960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vqi03400
]
CCZ37_04960
Enzymes [BR:
vqi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
CCZ37_04960
DNA repair and recombination proteins [BR:
vqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CCZ37_04960
RecFOR pathway proteins
CCZ37_04960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF3882
PurT_C
Motif
Other DBs
NCBI-ProteinID:
ASU21981
UniProt:
A0A223MWQ7
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All DBs
Position
1:1059372..1059893
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AA seq
173 aa
AA seq
DB search
MSIILGIDPGSRITGYGVIRQHGRYLYYLGSGCIRTSEKELPGRLKQIYAGVTEIITQFQ
PDAFAIEQVFMAKNADSALKLGQARGSAIVAAVNADLPVYEYAARLVKQSVVGTGSADKA
QVQHMVQQMLKLSAKPQADAADALGVAICHANTNKTLIALAGRASSAKKGRYR
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattattttaggtatagatcccggctcgcgaatcacaggttatggtgtgatcagg
cagcatggacgatatttgtactatcttggtagtggatgtattcgtacatccgaaaaagag
ttacctggtcggctcaagcaaatttacgctggtgtgacggaaatcatcacacaatttcag
cctgatgcttttgccatcgagcaagtctttatggcaaagaatgcggactcagcactcaaa
ctcgggcaagcaaggggcagtgctattgtggcggcggttaatgcagatcttccagtctat
gaatatgccgctcgactggttaaacaatctgtagttggtacgggtagtgctgataaagcg
caggtgcaacatatggtccagcaaatgcttaaattatcggctaagccacaagcggatgcc
gccgatgctttgggtgtggcaatttgtcatgcgaataccaataaaaccttgattgcctta
gctgggcgggcaagcagtgctaaaaaaggccgatatcgctga
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