Vibrio qinghaiensis: CCZ37_05900
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Entry
CCZ37_05900 CDS
T05259
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
vqi
Vibrio qinghaiensis
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vqi03009
]
CCZ37_05900
Enzymes [BR:
vqi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
CCZ37_05900
Ribosome biogenesis [BR:
vqi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CCZ37_05900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
ASU22151
UniProt:
A0A223MX76
LinkDB
All DBs
Position
1:1278061..1278756
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AA seq
231 aa
AA seq
DB search
MRLDKFLCDALGATRKEATKIIKSGDVTVNGKTQKSGSLQVTQECEVEWQGRELILHGPR
YIMLHKPAGYVCSHEDGFNHTAFILLDEVNVQDLHFAGRLDVDTTGLVLITDDGQWSHRI
TSPKHKCDKTYRVWLADPIETNYVEQFLTGIELRNERELTLPAQLEVVGENECLLTIHEG
KYHQVKRMFAALGNKVVGLHRERIGHIVLDEALEPGEYRYLTDQEVASIGA
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcggttagataaatttttgtgtgatgcgttaggtgcgacacgtaaagaagccaccaag
atcatcaaaagtggtgatgtcacagtaaatggtaagacgcaaaaaagtggttcattgcag
gtgacgcaggagtgtgaggtggagtggcaaggtcgtgagttaatcttgcatggcccgcgc
tatatcatgttacacaaacccgctggctacgtttgctcacatgaagacggcttcaatcat
acggcatttattttgctcgatgaagtgaatgttcaagacttgcattttgcaggacgtttg
gatgtcgataccacaggtttggttctgatcaccgatgacggccaatggtctcatcgcatt
acctcgccaaaacacaaatgcgacaaaacctaccgtgtctggcttgccgaccctattgaa
acgaactatgtcgaacaattcttaacgggtattgaactgcgtaatgagcgtgagctaacc
ttgcctgcgcaattggaagttgtcggtgagaatgaatgtttactgaccattcatgaaggc
aaataccatcaagttaaacgcatgtttgctgctttaggcaataaagtggttggccttcac
cgtgagcgcattggtcatattgtgctagatgaggcactagagcccggtgaataccgttat
ttgactgaccaagaagtggcttcgattggggcttga
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