Vibrio qinghaiensis: CCZ37_08355
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Entry
CCZ37_08355 CDS
T05259
Name
(GenBank) LysR family transcriptional regulator
KO
K10918
LysR family transcriptional regulator, transcriptional activator AphB
Organism
vqi
Vibrio qinghaiensis
Pathway
vqi05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
CCZ37_08355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vqi03000
]
CCZ37_08355
Transcription factors [BR:
vqi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CCZ37_08355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ASU22607
UniProt:
A0A223MYZ3
LinkDB
All DBs
Position
1:1829140..1830015
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AA seq
291 aa
AA seq
DB search
MKLDDLNLFRLVVENGSYTATSRKTMIPVATITRRIQALEDSLNLRLLNRHARKLSLTEA
GERFFQECSPLLHRLAATAEELTDECRGASGKLRISSPSNVTKRMMMPIFNAFMIRYPDI
NIELTTSNQADQLDPTEWDVIFRVGPQRDSSLIARKINEVKDVLVASPGYLAKHPAPTHA
EELSNHSLLKGYPLVKWQLTNNKGECVVNCDTGRFQANALNVVRSACSEGLGITLMPDVM
IKEFIEEGSLVRVLEDWVSNPRDIYMLYNHKDHLPEKVRLFIDFVIAYHID
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagatgacctaaacctctttcgactggttgtcgaaaatggaagctataccgca
acttctcgtaaaacaatgatcccagttgcgaccattacccgacgcattcaagcattggaa
gattctctgaatcttaggctgttgaatcgccatgctcgaaaactttcactcactgaagcg
ggagagcgtttttttcaagagtgctcaccgttgctgcatcgcttagcggcaacagcagaa
gagctcaccgatgaatgccgtggcgcttcaggaaaactcagaatatcgtcaccatccaat
gtcacgaaacgtatgatgatgcctatcttcaatgccttcatgatacggtacccagatatc
aacatagaactcaccactagcaatcaggccgatcagctcgacccaaccgaatgggatgtc
atttttagagttggccctcaacgagactccagtttgattgcgcgaaaaattaatgaagtg
aaagatgtgttagtcgcaagcccagggtatttagcgaaacaccctgcaccaactcatgcc
gaagagctcagtaatcactcattactaaaaggataccccctagtaaagtggcagttgacc
aacaataaaggggaatgcgtggtcaattgtgatactggtcgttttcaggccaacgcttta
aacgtagtgcgcagcgcttgctctgaggggctgggtatcaccttaatgccagatgtgatg
attaaagaatttatcgaagaaggcagcttagtcagagtactggaagactgggtttccaac
cctcgtgatatttatatgctgtacaaccacaaggatcatctacctgaaaaagtcaggcta
tttattgattttgtgattgcctatcacatcgactag
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