Vibrio qinghaiensis: CCZ37_11060
Help
Entry
CCZ37_11060 CDS
T05259
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
vqi
Vibrio qinghaiensis
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vqi03021
]
CCZ37_11060
Transcription machinery [BR:
vqi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CCZ37_11060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
AAA_22
WWE
Motif
Other DBs
NCBI-ProteinID:
ASU23085
UniProt:
A0A223MZV4
LinkDB
All DBs
Position
1:complement(2397007..2399916)
Genome browser
AA seq
969 aa
AA seq
DB search
MSFALGQRWISDTESDLGLGTVVALDARTVTLMFAASEENRVYARSDAPVTRVTFNSGDV
VESQEGWSLRVEQVVEEQGLLTYLGTREDNDESGVALREIFLSHQIRFNKPQDKLFAGQI
DRMDNFVLRYRALTNQYQQHKSPMRGLCGMRAGLIPHQLYIAHEVGRRHAPRVLLADEVG
LGKTIEAGMIIHQQVLSGRAERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCVEAFA
EAHNPFDTQQYVLCSLDFLRKSRQRFEQALEAEWDLLVVDEAHHLEWSQDKPSREYQVVE
GLAQNTPAVLLLTATPEQLGRESHFARLRLLDPDRFYDYEAFVEEEEQYAPVADSVSALF
SGEKLQNEAKNQITELLSEQDVEPLFRIIESDADEESKASARQELIDNLMDRHGTGRVLF
RNTRAAIKGFPVRNVHLMPMEIPAQYTTSMRVAGMIGGKLSAQARAMKMLYPEEIFQEFE
GDDASWWQFDSRVNWLLEKVKEKRSEKILVIASRASTALQLEQALREREGIRATVFHEGM
SILERDKAAAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD
RIGQHRDIDIHVPYLKGTSQAILARWFDEGLNAFAETCPTGRAVYDKYADDLIDMLASGN
IDTLDEIIEQSATLNKTLKAQLEQGRDRLLEMHSNGGEKALKIVESIASTDGDTNLVTFA
LSLFDAIGLNQDDRGENALVVTPSEHMMVPSYPGLPYEGATITFDRDTALSREDMNFISW
EHPMIQGGIDLLMSEGVGTSAVSLLKNKALPVGTLLLELIYVVDAQAPKRSGISRFLPQT
PIRLMMDARGNDLSAQVEFESFNRQLSPVNRHLASKLVTSVQNDVHSLIAASESQVVSRV
EAIREQAQKEMQSSLNGELERLLALKAVNPNIRDEEISAIEEQINELSGYIGKAQFQLDS
LRLIVVTHN
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgagttttgctttggggcaacgctggataagcgatacagaaagtgatcttggtttaggt
actgtggtagcgcttgatgcgcgtactgtgaccttgatgtttgctgcatcagaagaaaac
cgcgtttatgcacgcagtgacgccccggtaacacgagtgacgttcaatagcggcgatgtg
gttgaaagccaagaaggctggtcgctacgcgttgagcaagttgttgaagaacaaggacta
ctcacttatctcggtacgcgcgaagacaacgatgaaagcggcgtggcgctacgtgaaatt
ttcttaagtcaccaaatccgtttcaacaaaccgcaagataaattgttcgcaggtcaaatt
gatcgcatggataattttgtgttgcgttatcgcgccctcactaaccaatatcaacaacac
aaaagcccaatgcgtggtttatgtggcatgcgcgcgggcctgattcctcatcagctttat
atcgcacatgaggttggccgtcgccatgcgccccgcgtgttattagccgatgaagtgggg
ttaggtaaaaccattgaagcggggatgatcattcatcaacaagtgctttctggccgcgcg
gaacgtattttaattgtggtgccggaaaccttgcagcaccaatggttggtggagatgatg
cgtcgctttaatcttcatttctccatttttgatgaggagcgctgtgttgaagcgttcgct
gaagcacacaacccttttgatactcagcaatatgtgctttgttcgctcgattttctgcgt
aaaagtcgtcaacgttttgaacaagcacttgaggcggagtgggatctattggtggtggat
gaagcgcaccatctagaatggagccaagataaaccaagccgcgaataccaagtggtcgaa
gggctagcgcaaaataccccagcggtattgctgctaacggcaacgccggagcaattgggc
cgtgaaagccactttgcgcgtttgcgtttgctcgatcccgatcgtttttacgattacgag
gcgttcgttgaagaagaagagcaatatgcgcccgtagccgattcagtcagtgccctgttt
tcgggtgagaagttgcaaaacgaagccaaaaaccaaatcactgagctactttcagagcaa
gatgttgagccgctgtttcgcattattgaaagcgatgccgatgaagagagcaaagcctct
gctcgccaagagctgattgataatctgatggatcgccatggcacaggccgcgtgctgttt
agaaacacccgcgctgcgattaaaggattccctgtgcgtaatgtgcacttgatgccgatg
gaaatccccgcgcaatacacgacctcgatgcgagtggctggcatgatcggcggtaagctc
agtgctcaggctcgcgcgatgaaaatgctctaccccgaagagattttccaagagtttgaa
ggcgatgatgcaagctggtggcagtttgattctcgcgttaactggctgcttgaaaaagtg
aaagagaaacgcagcgaaaagattttagtgatcgcttctcgcgctagcaccgcgttacaa
ctggagcaagcactgcgtgagcgtgaaggcattcgcgccaccgtttttcatgaaggtatg
tcgattttagaacgtgataaagccgccgcttatttcgcacaagaagagggtggcgcgcaa
gtattgatctgtagtgaaatcggctctgaagggcgtaacttccaatttgctaaccagttg
gtgatgtttgatctgccgtttaacccagatcttttagagcaacgcattggccgtttggat
cgtattggtcaacaccgtgatatcgatatccatgtgccgtaccttaaaggcacatcgcaa
gcgattttggcgcgttggtttgatgaaggcttgaatgcatttgctgaaacctgcccaaca
ggccgcgctgtgtatgataaatatgccgatgatctgattgacatgctggcttcgggaaat
atcgatacgttggatgagatcattgaacagtcagcaacgctcaacaaaacgttgaaggct
cagcttgaacaagggcgtgaccgactgcttgaaatgcattcaaacggtggcgaaaaagca
ttgaaaatcgtcgaaagtatagcatcaacggatggcgatactaacttggttactttcgct
ttgagcttatttgatgcgatcggtttaaaccaagatgatcggggtgaaaacgcgctggtg
gtcacaccatcagagcacatgatggtgccaagctaccccggtttgccgtatgaaggagcg
accatcacttttgatcgtgatacggcattatcgcgtgaagatatgaatttcatcagttgg
gaacacccgatgattcaaggcgggatcgacctactgatgagcgaaggcgtgggaacatcg
gcggtttctctgctgaaaaataaagctctgcctgttgggactttgctgcttgagttgatc
tatgtggtggatgcacaagcgccaaaacgcagtggtatcagccgcttcctacctcaaaca
ccaatccgtttgatgatggatgcgcgtggtaatgatctctctgctcaagttgagtttgaa
agcttcaaccgccaattaagcccagtgaatcgtcatttggccagcaagctcgttacgtcg
gtacaaaatgatgtgcatagcttaattgctgccagtgaaagccaagttgtgagccgtgtt
gaagcgattcgtgaacaagcgcagaaagagatgcagtcgagcttaaacggtgaactggag
cgcttattggcgcttaaagcagtcaacccgaacattcgtgatgaagagatcagcgcgatt
gaagagcagattaacgagttaagtggttacatcggtaaagcgcaattccaactggattcg
ttgcgtttaatcgttgtgacgcataactga
DBGET
integrated database retrieval system
