Vibrio qinghaiensis: CCZ37_11325
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Entry
CCZ37_11325 CDS
T05259
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
vqi
Vibrio qinghaiensis
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vqi03009
]
CCZ37_11325
Enzymes [BR:
vqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CCZ37_11325
Ribosome biogenesis [BR:
vqi03009
]
Prokaryotic type
rRNA helicases
CCZ37_11325
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
NACHT
Helicase_C_2
CMS1
UvrA_inter
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASU23135
UniProt:
A0A223MZZ9
LinkDB
All DBs
Position
1:complement(2449527..2450912)
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AA seq
461 aa
AA seq
DB search
MSNLSFSTVNLQPELLSNLDTLGYTKMTPIQALSLPTILAGKDVIGQGKTGSGKTAAFGL
GVLSNLNVKRFRVQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSL
EHGAHILVGTPGRILDHLDKGRIDLSELNTLVLDEADRMLEMGFQEALDAIINETPTSRQ
TLLFSATFPNQIKEIAQRIMREPEMVKVESTHDTSSIQQYFYKVEGTEARDRALELLLLH
HQPESAVVFCNTKKEVQSVAEDLHHKGFSVVELHGDLEQRDRDQALVQFANKSISILVAT
DVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGLAFSFFSDSEMHRVAMIDE
YMDMPIEPAKLPDASALNNAPYQANMVTIQIDGGKKQKVRPGDILGALTSNDGIDGQYVG
KINMLPMRSYVAVHKSVAKKALKKMETGKMKGRQFRARLLK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaatctctctttttcaacggtaaatctacaacccgaacttctttctaacctcgat
actttgggatacaccaagatgacgccgattcaggcgttaagcttgccaaccattttggcg
ggtaaggatgtgattggccaaggaaaaacaggctcaggaaaaacggcagcgtttggttta
ggtgtattatctaacctcaacgttaagcgttttcgcgttcaagcattggtgttgtgtcca
acccgtgagttagccgatcaagtcgcaacggatattcgcacactcggccgcgccattcat
aatatcaaagtgctcaccttatgtggcggcatgccaatggggccacaaattggttcgtta
gagcacggcgcacacattttggttggtactccggggcgtattcttgaccatttagacaaa
ggtcgtatcgatctttctgaactcaatacgttagtgcttgatgaagcggaccgaatgctc
gagatgggtttccaagaagcgttggatgcgatcatcaatgaaacgccaaccagccgccaa
acattgctgtttagtgcgacgttccccaatcaaatcaaagaaattgcgcagcggattatg
cgtgagcctgaaatggtcaaagttgaatccacccatgatacgtcgagcattcagcaatat
ttttataaagtagagggtacagaggcgcgtgatcgcgcgttagaactgctgcttttacac
catcagcctgaatctgccgtggtgttctgtaatacaaagaaagaagtacaaagtgttgct
gaagatctacatcacaagggctttagtgtggtggaactgcatggtgacttagagcagcgt
gaccgtgaccaagctttggtgcagtttgctaataaaagtatctccattttagttgccacc
gatgtggcggcacgcggccttgatgtggataacttagatgcggtatttaactttgagtta
tcacgtgatcctgaagtgcacgtgcaccgcattgggcgtactggccgagcgggcagtaaa
ggtttagcttttagcttcttcagtgacagtgaaatgcaccgagtggcgatgattgatgaa
tatatggatatgcccatcgaacccgctaaattgcctgatgccagtgcgctaaacaacgcg
ccttatcaagccaatatggtcactatccagattgatggcggtaaaaagcagaaagtgcgc
ccgggagatattctaggggcgttgaccagtaacgacggtattgacggtcaatatgtcggt
aaaattaacatgttaccgatgcgcagctacgttgcagtccataaatcggtggcgaaaaaa
gcgctgaagaaaatggaaactggcaagatgaaaggacgccaatttagagcacgtcttttg
aaatag
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