Vibrio qinghaiensis: CCZ37_11350
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Entry
CCZ37_11350 CDS
T05259
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vqi
Vibrio qinghaiensis
Pathway
vqi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CCZ37_11350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vqi03021
]
CCZ37_11350
03400 DNA repair and recombination proteins [BR:
vqi03400
]
CCZ37_11350
Enzymes [BR:
vqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CCZ37_11350
Transcription machinery [BR:
vqi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CCZ37_11350
DNA repair and recombination proteins [BR:
vqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CCZ37_11350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ASU23140
UniProt:
A0A223N056
LinkDB
All DBs
Position
1:complement(2453550..2454542)
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AA seq
330 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQISTTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IEGVLHEYSTKEGIQEDILEILLNLKGLAVRVAEGKDEVFITLNKSGSGPVVAGDITHDG
DVEITNPEHVICHLTDDNAEIAMRIKVERGRGYVPASARIHTEEDERPIGRLLVDATYSP
VDKIAYSVEAARVEQRTDLDKLVIDMETNGTLEPEEAIRRAATILAEQLDAFVDLRDVRV
PEEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKS
LTEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttcttaagccacgtcttgttgatatcgaacagattagc
acgacacacgcaaaagtaactcttgagccgttagagcgtggtttcggccatactctgggt
aatgcacttcgccgtattcttctatcttcaatgccaggttgtgctgtaactgaagtggag
attgaaggcgtactacacgagtacagcaccaaagaaggcattcaagaagatatccttgag
atccttctgaacctaaaaggtttggctgttcgcgttgccgaaggcaaagatgaagtgttc
attacgctaaacaaatcaggctcgggccctgttgttgcaggtgacatcacccatgatggt
gatgtagagatcactaaccctgagcacgtgatttgtcatctaacggatgacaacgctgag
atcgctatgcgtatcaaagtagaacgtggtcgtggttatgttccagcttcagctcgtatc
catactgaagaagatgagcgtccaatcggtcgtctacttgtagatgctacttacagccca
gtagacaaaattgcctactctgtggaagccgctcgtgtagaacagcgtactgatttagac
aagctcgttatcgatatggaaacgaacggtactctagaacctgaggaagcaatccgtcgt
gcagcaactattcttgctgagcaattggatgcgttcgtagatcttcgtgatgtacgtgta
cctgaggagaaggaagagaagccagaattcgatccaatcctactgcgtcctgtagacgat
cttgaactaacagttcgctctgctaactgtctgaaagcagaagcgattcactacatcggt
gatctagtacagcgcactgaggttgagctacttaaaacgccaaaccttggtaagaaatct
cttacagagattaaagacgtgcttgcatcacgtggtctatctttgggcatgcgcctagag
aactggccgccagcgtctatcgctgaagattaa
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