Vibrio qinghaiensis: CCZ37_12100
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Entry
CCZ37_12100 CDS
T05259
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vqi
Vibrio qinghaiensis
Pathway
vqi03030
DNA replication
vqi03430
Mismatch repair
vqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCZ37_12100
03430 Mismatch repair
CCZ37_12100
03440 Homologous recombination
CCZ37_12100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vqi03032
]
CCZ37_12100
03400 DNA repair and recombination proteins [BR:
vqi03400
]
CCZ37_12100
Enzymes [BR:
vqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCZ37_12100
DNA replication proteins [BR:
vqi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCZ37_12100
DNA repair and recombination proteins [BR:
vqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCZ37_12100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
DEDDh_C
SAP_new25
Motif
Other DBs
NCBI-ProteinID:
ASU23283
UniProt:
A0A223N0J3
LinkDB
All DBs
Position
1:2605491..2606123
Genome browser
AA seq
210 aa
AA seq
DB search
MNWFTRHYWFHKLKDSPYQPLFATPMQGEYVSLDCETTSLDPNRAELVTIAATKIIDNRI
LTSQPFEVRLSAPQSLDSGSVKIHKIRHQDLVDGIDEQEAITRLLDFIGNRPLVGYHIRY
DKKILDLACRRHLGFPLPNALIEVSQIYHDQLERMLPNAYIDLSLEAICRHLDLPIQDKH
DALQDAIAAALVFVRLTKGDLPPFVAPYSR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
ttgaattggtttacacgccattattggtttcacaaactaaaagactcgccttatcagcca
ctgtttgcaacgccgatgcaaggggaatatgtatcgctcgattgcgaaaccaccagcctt
gacccgaatcgcgccgagttagtgacgattgccgccaccaaaattatcgacaaccgcatt
ttaaccagccagccatttgaagtgcgtttgagcgcgccacaatcgctcgactcaggttca
gtcaaaatccacaaaattcgccatcaagatctggtcgatggcatcgacgagcaagaggcc
atcactcgcctattagactttatcggcaaccgacctttagtgggctatcacattcgttat
gacaagaaaatcctcgacctcgcttgtcggcgacatttaggctttccactgcccaatgct
ctcatcgaagtaagtcagatctatcatgatcagttagagagaatgttgccgaacgcgtac
atcgacctcagcttagaggcgatttgtcgccatctcgacttaccgatacaggataaacac
gacgcgctgcaagatgccatcgccgcggcattagtgtttgtgcgcttgaccaaaggtgat
ctacctccctttgttgcgccttactcgcgctag
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