Vibrio qinghaiensis: CCZ37_12465
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Entry
CCZ37_12465 CDS
T05259
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
vqi
Vibrio qinghaiensis
Pathway
vqi00521
Streptomycin biosynthesis
vqi00523
Polyketide sugar unit biosynthesis
vqi00525
Acarbose and validamycin biosynthesis
vqi00541
Biosynthesis of various nucleotide sugars
vqi01100
Metabolic pathways
vqi01110
Biosynthesis of secondary metabolites
vqi01250
Biosynthesis of nucleotide sugars
Module
vqi_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CCZ37_12465 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CCZ37_12465 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CCZ37_12465 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CCZ37_12465 (rfbB)
00525 Acarbose and validamycin biosynthesis
CCZ37_12465 (rfbB)
Enzymes [BR:
vqi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CCZ37_12465 (rfbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
ASU23354
UniProt:
A0A223N0H4
LinkDB
All DBs
Position
1:complement(2687633..2688697)
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AA seq
354 aa
AA seq
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MKILVTGGAGFIGSAVVRHIIQNTQDSVINVDKLTYAGNLESLQDIESSGRYSFEPVDIC
NRSELDRVFYVHQPDAIMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARSYWNTLES
DKKSAFRFHHISTDEVYGDLEGTDDLFTEETPYSPSSPYSASKASSDHLVRAWLRTYGFP
TIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYGDGMQIRDWLFVEDHARALYKVVT
EGQVGETYNIGGHNEKANIDVVNTLCALLEDLVPNKPANITHYADLITYVKDRPGHDVRY
AIDASKIELELGWKPEETFESGISKTVEWYLNNREWWSRVLDGSYSRERLGSGQ
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttagttactggcggtgctggttttatcggttcggcagttgttcgccatatt
attcaaaacacacaagatagtgtgatcaatgttgataagttgacctatgcggggaacttg
gaatcattacaagatattgaaagtagtggccgttattctttcgaaccagtcgatatctgt
aaccgttcagaattagatcgtgtgttttatgtgcatcaaccagatgcgattatgcacttg
gccgctgaatcccatgtggaccgttctattgatggcccagccgcgtttattgagaccaat
atcgttggcacttataccttgcttgaagctgcgcgcagttattggaacacgcttgagagc
gataaaaaatcggcattccgcttccatcatatttcaaccgatgaagtgtatggtgatttg
gaaggtacagatgacctctttaccgaagagactccatattcaccttcctcaccttattct
gcatcaaaagcctctagcgaccatttagtacgcgcttggttacgtacctatggttttcct
accatagtgactaactgctctaacaattatggaccataccactttcctgaaaagcttatt
ccattaatgattctgaacgctctggacggcaaaccacttcctgtctacggcgatggaatg
caaattcgcgattggctatttgtcgaagatcacgctcgagcgctttataaagtggtgaca
gaaggccaagtaggtgaaacctacaacattggtggtcataacgaaaaagctaacattgac
gtggtgaacacactctgtgcattacttgaagacttagttccgaataaacctgccaacatt
acccattacgcagaccttattacttacgttaaagaccgccctgggcatgatgtgcgttac
gcgattgatgcctctaaaatcgagctagagctaggctggaagccagaagagacgtttgaa
tcaggtattagcaaaactgtggaatggtatttgaataaccgtgaatggtggagccgagta
ttagatggttcatacagccgtgaacgtttaggctccggacaataa
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