Vibrio qinghaiensis: CCZ37_12770
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Entry
CCZ37_12770 CDS
T05259
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vqi
Vibrio qinghaiensis
Pathway
vqi03420
Nucleotide excision repair
vqi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCZ37_12770 (uvrD)
03430 Mismatch repair
CCZ37_12770 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vqi03400
]
CCZ37_12770 (uvrD)
Enzymes [BR:
vqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCZ37_12770 (uvrD)
DNA repair and recombination proteins [BR:
vqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCZ37_12770 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CCZ37_12770 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
PhoH
Motif
Other DBs
NCBI-ProteinID:
ASU23411
UniProt:
A0A223N0P1
LinkDB
All DBs
Position
1:complement(2757076..2759250)
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AA seq
724 aa
AA seq
DB search
MMDPSLLLDGLNDKQREAVAAPLENLLVLAGAGSGKTRVLVHRIAWLISVENASPFSVMS
VTFTNKAAAEMRGRIEELMMGSASGMWNGTFHGICHRILRAHYLDARLPEDFQILDSEDQ
LRLLRRLIKAQNLDEKQWPTRQVCWWINGKKDEGLRPKHIDAYRDPVTQTYLQLYSAYQE
ACDRAGLVDFAEILLRCHEMLRDKQHIREHYQARFKHILVDEFQDTNNIQYAWLRMMAGR
DCHVMIVGDDDQSIYGWRGAKIENLDKFTQEFPSVNTIRLEQNYRSTKTILQASNALIAN
NTERMGKELWTDGSEGEPISIYSAYNDLDEARFTVNKIKEWRDKGGALEDCAMLYRNNAQ
SRVLEEALIQAGLPYRIYGGMRFFERQEIKDALSYLRLMSNRNDDSAFERVVNTPPRGLG
DKTLETIRFAARDRGCTLWQASLVLLEEKVLTGRAASALSRFIELVNALEDDSAEMPLHS
QTDHVIKTSGLFEMYQLEKGEKSKARIENLEELVTATRQFEKPEEADEMSMLTAFLTHAA
LEAGEGQADEFDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLC
YVGMTRAMQKLYITYAEIRRLYGQDKYHKPSRFIRELPEHCLDEVRMKAQVSRPSSAGRF
SQTAVKENFNETGFSLGARVKHPIFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYAK
LEKV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatggatccttctctcttactcgacggtctcaacgataaacagcgcgaagcggttgcc
gcgcctttagaaaacttgctggtgcttgccggagcggggagtggtaaaacccgagtattg
gtgcatcgcattgcttggcttatctcggttgaaaacgcctcgcctttttcagtgatgtcg
gtgacttttaccaacaaagcggcggcggaaatgcgtggccgaattgaagagttgatgatg
ggcagtgcatcgggcatgtggaatggtaccttccacggtatttgccaccgtattttacgc
gctcactatctcgatgctcgcctgccagaggattttcagatcctcgattctgaagatcaa
ctgcgtttgctgcgccgcttaatcaaagcacaaaacctagatgagaagcagtggccaacg
cgccaggtgtgctggtggattaacggtaaaaaagatgaaggtcttcgtcctaagcacatc
gatgcgtaccgcgatcccgtgactcaaacctatttgcagctttattccgcgtaccaagag
gcgtgcgatcgcgcaggtttggttgattttgccgaaattttgctgcgttgccacgagatg
ttgcgtgataagcagcacattcgtgaacattatcaagcgcgctttaaacacatcttggtc
gacgaatttcaagacaccaataacatccaatacgcgtggctgcgcatgatggctggtcgc
gattgccacgtgatgatcgtcggtgatgatgatcagtccatttatggctggcgtggtgcc
aaaattgaaaacctcgacaaattcacgcaggaatttccgagcgttaataccattcgttta
gagcaaaactaccgttcaaccaaaaccattttgcaagcctcgaacgcactgatcgcgaac
aacaccgaacgaatgggtaaagagctctggaccgatggcagcgaaggcgagccgatttct
atctattcggcttacaacgatcttgatgaggcgcgttttaccgtcaataaaatcaaagag
tggcgagacaaaggtggcgcattagaagattgtgcgatgctttatcgcaacaacgcccaa
tctcgtgttttggaagaagccttgattcaagcaggcttgccctatcgcatctacggcggc
atgcgcttcttcgagcgccaagagatcaaagatgcgttaagttacttgcgtttgatgtct
aaccgcaatgatgattcggcctttgagcgagtcgtaaatacgccaccgcgtggcttgggt
gataaaacgctggaaaccattcgttttgcggcgcgagatcgcggctgtaccttgtggcaa
gcgagccttgtgttgttggaagaaaaagtgctcacaggacgtgcggcaagcgcattaagc
cggtttattgaactggtcaatgcccttgaagatgatagcgctgagatgccgctacacagt
caaactgaccatgtaatcaaaacctctggcttgtttgagatgtatcagcttgaaaagggt
gaaaagtccaaagccagaattgaaaacttggaagagctagtcaccgcaacacgccaattt
gaaaagccagaagaagcggatgagatgagcatgttgacggcctttttaacccacgcagcg
ctggaagcgggcgaagggcaggctgacgagtttgatgatgccgtacagttaatgacactg
cacagcgcgaaagggttagagttcccattggtgtttatggttggcgttgaagagggcatg
ttccctagccaaatgtcggccgaagaagcggggcgattggaagaggagcgccgtttgtgt
tacgtcggaatgacgcgcgccatgcaaaagctctacattacttacgctgaaattcgccgt
ttatacggtcaggataaataccataagccgtcacgctttatccgtgagctgccagaacac
tgccttgatgaagtgcgtatgaaagcgcaagtgagccgaccaagcagtgccgggcgtttt
agtcaaacagcggtcaaagagaactttaacgagacgggttttagcttgggcgcacgggta
aaacaccctatttttggtgaaggcaccatcattaatttcgaaggcagtggcccgcaaagt
cgagtgcaagtcgcttttaacggtgaaggcattaaatggctagtgactgcttatgccaag
ctagagaaagtgtaa
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