Vibrio qinghaiensis: CCZ37_12975
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Entry
CCZ37_12975 CDS
T05259
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vqi
Vibrio qinghaiensis
Pathway
vqi03030
DNA replication
vqi03410
Base excision repair
vqi03420
Nucleotide excision repair
vqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCZ37_12975
03410 Base excision repair
CCZ37_12975
03420 Nucleotide excision repair
CCZ37_12975
03440 Homologous recombination
CCZ37_12975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vqi03032
]
CCZ37_12975
03400 DNA repair and recombination proteins [BR:
vqi03400
]
CCZ37_12975
Enzymes [BR:
vqi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCZ37_12975
DNA replication proteins [BR:
vqi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CCZ37_12975
DNA repair and recombination proteins [BR:
vqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CCZ37_12975
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCZ37_12975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
ASU23586
UniProt:
A0A223N1M3
LinkDB
All DBs
Position
1:complement(2804564..2807362)
Genome browser
AA seq
932 aa
AA seq
DB search
MARIPDNPFILIDGSSYLYRAFHAYPGTMSNGEIPTNAVYGVVNMLRSMMRQFSAERMVV
IFDAKGKTFRDDMYPQYKANRPPMPDDLRCQIEPLHNVIRAMGLPLISIEGVEADDVIGT
LASQASQAGMPVLISTGDKDMAQLVDENVTLINTMTNVVLDREGVIEKFGIPPELIIDYL
ALMGDKVDNIPGVPGVGEKTAIALLQGIGSLEQIYDNLEKIALLGFRGSKTMAQKLADNR
ENAFLSYQLATIKLDVALEEKPETLFKTQPNIDELIKLYGQLTFKSWLTELLDGGNGVID
ADEKVGAVNSSSSSSQAREMDTTAATIDRSQYQTILDEETFNTWLEKLKAAEVFAFDTET
DSLDYMVANLVGLSFAIEEGVAAYVPVAHDYLDAPKQLDRDWVLAQLKPILEDESQAKVG
QNLKYDASIVARYGINMKGIKHDTMLASYVYNSVGGKHDMDSLALRFLQHSCISFEQVAG
KGKNQLTFNQIELEQAAPYAAEDADVTLRLHHRLMSHIEQDEKLNRIYQQIEVPLVPVLS
RMERTGVMIDDMLLGAQSHEIAARLEQLEQQAFDIAGQPFNLSSPKQLQTILFEQMGLPV
IKKTPTGTPSTNEEVLQELALDGYPLPKVIIEHRGLAKLKSTYTDKLPKMINPTTGRVHT
SYHQAVTATGRLSSTDPNLQNIPIRNEEGRRIRQAFIAPHGWKILAIDYSQIELRIMAHL
SGDKALLEAFQQGKDIHAATAAEILGVSIEQVSSEQRRRAKAVNFGLIYGMSAFGLAKQL
GIPRYEAQEYMDKYFERYPGVMQYMEDTRSTASELGYVETLFGRRLHLPEIKSRNGMRRK
AAERAAINAPMQGTAADIIKKAMLLVDAWIEEHGQGRVKLLMQVHDELVLEVQETALAEI
EIKVQQLMESAVTLAVPLVADTGHGDNWDQAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcatacctgacaacccgttcattctgattgatggctcttcttacctttaccgt
gcatttcatgcctacccaggcaccatgagtaatggcgaaattccaactaatgctgtctat
ggcgtggtcaatatgctccgtagcatgatgcgccagttttccgctgagcgtatggtggtt
atttttgacgcgaaaggaaaaaccttccgcgatgatatgtacccacaatacaaagctaac
cgtccaccaatgcctgatgatctacgttgtcagattgagccgttgcacaatgttatccgt
gcgatggggctaccgctgatatcgattgaaggtgtcgaagccgatgacgtgattggtacg
ctagcctctcaagcatcgcaagcaggcatgccagtgctgatcagcactggtgataaagac
atggcacagctggtggatgagaatgtcaccttgatcaataccatgacgaatgtggtactt
gaccgtgaaggggtgattgaaaaattcggtatccctcccgagcttatcatcgactatctg
gctttgatgggcgataaagtcgataacattcctggtgtaccgggtgtcggtgagaaaacg
gcgattgcgttgctgcaaggcattggcagcctagagcaaatttacgataacctcgaaaaa
attgcgctactgggcttccgtggttctaaaactatggcgcaaaaactggcggataatcgt
gaaaacgcatttctctcttatcaattggccaccatcaagttggatgtagcgctggaagaa
aaaccagaaaccttgttcaaaacccaacctaatatcgatgagttgattaaactttatggt
cagctcacgtttaaatcctggttaacggaattgctggatgggggaaatggggtgattgac
gctgatgaaaaagtgggtgcggtaaactcttcttcttcttcttcacaagcaagggagatg
gatacaaccgccgccacgattgatcgcagccaatatcaaaccattttagatgaagagaca
tttaatacttggttagaaaaactgaaagcggcagaagtgtttgcgtttgatacggaaacc
gacagcctcgattatatggtagcgaatttagttggcctctcttttgcaatcgaagagggc
gttgcagcgtatgttcctgttgcgcatgactatcttgacgcaccaaagcaactggaccgt
gattgggtactcgcccaacttaaacccattttagaagatgaaagccaagccaaagtgggg
cagaacctaaaatacgatgccagcattgttgcgcgttacggtatcaatatgaaaggcatc
aagcacgatacgatgctcgcatcttatgtgtacaacagcgtcggtggcaaacatgatatg
gacagtttggcgctacgattcttgcaacacagctgtatttcatttgaacaggtggcgggc
aaaggtaaaaaccagctgaccttcaaccaaatcgaacttgagcaagcggcaccgtacgct
gcggaagatgctgatgtgactttgcgacttcatcaccgtttgatgagtcatattgagcaa
gatgagaagctcaatcgcatctaccaacagatagaagtacctcttgttcccgtgttatca
cgtatggaacgcacaggcgtgatgatcgatgatatgttgcttggcgcgcaatcgcatgaa
atcgctgctcgtttagagcaactagaacagcaagcgtttgatatcgcgggtcaacctttc
aacctaagctcaccaaaacagctgcaaaccattttgtttgagcagatggggctaccggtg
attaagaaaacgccaacaggaacaccttccaccaatgaagaagtactgcaagagttggca
ctcgacggctatcctctgcctaaagtgatcattgaacatcgtggtttagctaagttgaaa
tcaacctataccgataaactgcctaaaatgatcaacccaaccacagggcgagtgcatacc
tcgtatcaccaagctgtaaccgccactggtcgtttgtcttcaaccgatccaaatttgcaa
aacattccgatccgtaacgaagaaggacgccggatccgtcaagcctttatcgctcctcat
ggctggaaaattctggctatcgattactcgcaaattgagctgcgcattatggcgcacttg
tccggcgataaagcgctgcttgaagcattccagcaagggaaagatatccatgcggcaacc
gcggctgaaattcttggagtgagtattgagcaagtcagcagtgagcagcgtcgccgtgcg
aaagcggttaactttggtttgatttacgggatgagcgcctttggtttagccaagcagctc
ggcattcctcgttatgaagcccaagaatatatggataaatactttgagcgttatcctggc
gtgatgcaatacatggaagatacacgctctacggctagcgaacttggctatgttgaaact
ttatttggtcgtcgtttgcatctgcctgaaattaaatcgcgtaatgggatgcgtcgcaaa
gcggccgaacgtgccgctatcaatgctccaatgcaaggtacggcggcggatatcatcaaa
aaagcgatgctattagtcgatgcttggattgaggagcatggacagggacgcgttaaactc
ttgatgcaagtgcacgatgaactggtgcttgaggtgcaagagacggctttagccgaaatt
gaaattaaagtacaacaattgatggaatcagcagtaacgctagcggtgccattggtcgcg
gatactggtcatggagacaactgggatcaggcgcattag
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