Vibrio qinghaiensis: CCZ37_13200
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Entry
CCZ37_13200 CDS
T05259
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vqi
Vibrio qinghaiensis
Pathway
vqi00071
Fatty acid degradation
vqi00280
Valine, leucine and isoleucine degradation
vqi00310
Lysine degradation
vqi00362
Benzoate degradation
vqi00380
Tryptophan metabolism
vqi00410
beta-Alanine metabolism
vqi00640
Propanoate metabolism
vqi00650
Butanoate metabolism
vqi00907
Pinene, camphor and geraniol degradation
vqi00930
Caprolactam degradation
vqi01100
Metabolic pathways
vqi01110
Biosynthesis of secondary metabolites
vqi01120
Microbial metabolism in diverse environments
vqi01200
Carbon metabolism
vqi01212
Fatty acid metabolism
Module
vqi_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CCZ37_13200 (fadB)
00650 Butanoate metabolism
CCZ37_13200 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
CCZ37_13200 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CCZ37_13200 (fadB)
00310 Lysine degradation
CCZ37_13200 (fadB)
00380 Tryptophan metabolism
CCZ37_13200 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CCZ37_13200 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CCZ37_13200 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CCZ37_13200 (fadB)
00930 Caprolactam degradation
CCZ37_13200 (fadB)
Enzymes [BR:
vqi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CCZ37_13200 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CCZ37_13200 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CCZ37_13200 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
CCZ37_13200 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF5546
Motif
Other DBs
NCBI-ProteinID:
ASU23482
UniProt:
A0A223N0T6
LinkDB
All DBs
Position
1:2847700..2849871
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQANTLQVKELQDGIAELRFCSKESVNKLDLATLESLNHALDALKAHQGLKGLILTSD
KESFIVGADITEFLGLFAKPAQELDQWLQFANSIFNKLEDLPVPTLAALTGHALGGGCEC
VLATDFRIGDATTSIGLPETKLGIMPGFGGCVRLPRVIGADNAMEVITQGKACRAEEALK
IGLLDAIVDSDKLLESALKTITSAINETVDWKKRRQQKTSALTLSKLEAMMSFTMAKGLV
AQHAGPHYPAPITAVIAIEEAVRCSRDEALAIERKHFVKLAHSEAAKSLVGLFLNDQYIK
ALAKKAAKSANKETGRAAVLGAGIMGGGIAYQSAIKGVPVLMKDIAQSSLNLGMTEASKL
LNKQLERGKIDGFKMASVLASITPSLHYAGIEQADVVVEAVVENPKIKASVLSEVEANVG
EDAVITSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSDETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSLLLRDGADFTQIDKVMERKFGWPMGPAY
LLDVVGIDTAHHAQAVMAQGFPERMGKQGRDAIDALFDANKYGQKNGSGFYQYTLDKKGK
PKKTFSEEVLTVLNVECGDKRTFDDQTIIERMMIPMINEVALCLEEKIIASPQEADMALV
YGLGFPPFRGGVFRYLDSLGLQNYVAMASQYQALGAMYHVPQLLLDMAEKGETFYGAQQA
SSI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagccaacaccctacaggtaaaggaattacaagatggtattgcggagttg
cgtttctgctccaaggagtcagtgaacaaacttgaccttgccactcttgaatcgctcaac
catgcacttgatgccctaaaagcccaccaaggactgaaaggccttattcttacttccgat
aaagaatcttttattgtcggggctgatatcactgagtttttaggtctctttgctaaacct
gcgcaagaactcgaccaatggctgcagtttgccaatagcattttcaacaaactagaagat
ctacccgttccgacactagccgctttaacagggcatgcgctaggcggtggatgtgagtgt
gtactcgctaccgatttccgtattggtgacgcgaccaccagcataggattaccggaaaca
aagcttggtattatgccggggttcggtggctgtgtgcgtctgcctcgtgtgattggtgcc
gacaatgctatggaagtgatcactcaaggcaaagcatgtcgtgctgaggaagcccttaaa
attgggctgctcgatgcgattgttgatagcgacaaactgcttgagtcagcactcaaaacc
atcacatccgccatcaatgaaaccgttgattggaaaaagcgtcgccagcaaaaaacgtcc
gcactgacactcagcaaattagaagccatgatgagcttcaccatggccaaaggcttggtt
gcccagcatgctgggcctcattatccagcgccaataacggctgtcattgcaatagaagaa
gccgtgcgctgtagccgtgatgaagcattggccattgagcgtaaacacttcgttaagctc
gctcattctgaagcggcgaaatccttggtcggtttattcctcaacgaccaatatattaaa
gcactggcaaaaaaagcggccaaatcagccaataaagaaaccggccgagcggcggtactt
ggtgcgggtatcatgggcggcggcattgcttatcaatcggcaataaaaggcgtgcctgtt
ttgatgaaagatatcgctcaatcgtcccttaatttaggtatgaccgaggcatctaagtta
ctcaacaagcagctagagcgcggaaaaattgatggttttaaaatggctagcgtgctcgca
tcgattacgcctagcctgcattatgctgggattgagcaagcggatgtggttgttgaagct
gtggttgaaaacccgaaaatcaaagcctcggtactaagtgaagtcgaagccaatgttggt
gaggatgcggttatcacctcgaacacctcaaccattccaatcaacctactggccaaatca
ctcaaacgtccagaaaacttctgtggtatgcacttttttaaccccgtacatcgtatgcca
ttggtggaaattattcgtggtgaacacacttccgatgaaaccatcaatcgagttgtcgct
tacgcggccaaaatgggtaaatcccccatcgtggtcaatgactgccctgggttcttcgta
aaccgcgtacttttcccttactttggtggctttagtttattactgcgcgatggcgctgat
ttcactcaaatcgataaagtgatggaacgtaagtttggttggccaatgggcccagcttat
cttctagatgtggtcggtattgataccgctcaccatgcacaagcagtaatggcacaaggt
ttccctgaacgtatgggtaaacagggccgcgatgctattgatgcactgtttgacgccaat
aaatatggccagaaaaatggcagcggtttctatcaatacactttagataagaaaggcaaa
ccgaagaaaactttctctgaagaggttctcactgttcttaacgtagaatgtggtgataaa
cgtacttttgacgatcaaaccatcattgagcgcatgatgattccgatgatcaatgaagtg
gcactctgtttagaagagaagatcatcgcctcaccccaagaagctgatatggcgttggtg
tacggcttggggttccctccttttagaggcggcgtatttcgctatctcgatagtcttggt
ttacaaaactacgttgcaatggcaagccaataccaagcattgggcgcgatgtatcatgta
cctcaactgctgcttgatatggcagaaaaaggcgagaccttctacggtgctcaacaagca
agttctatctaa
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