KEGG   Vigna radiata (mung bean): 106753980
Entry
106753980         CDS       T04126                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
vra  Vigna radiata (mung bean)
Pathway
vra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106753980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:vra03041]
    106753980
Spliceosome [BR:vra03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    106753980
 Complex C
   U5 SnRNP specific factors
    106753980
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_WDHD1_1st WDR55 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_SCAP ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st WD40_RFWD3 eIF2A Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_RIG_1st Beta-prop_DCAF12 Beta-prop_Nup120_160 Beta-prop_NWD2_C PEP5_VPS11_N Nbas_N
Other DBs
NCBI-GeneID: 106753980
NCBI-ProteinID: XP_014491385
UniProt: A0A1S3TC97
LinkDB
Position
Unknown
AA seq 345 aa
MQVFPSEGESALSVVGPRPMEWSTVPYNAPQAPGPNGKQRTSSLESPIMLLSGHQSAIYT
MKFNPAGSVVASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIISASPDK
TVRAWDVETGKQIKKMVEHLSYVNACCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFP
DKYQITAVGFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITGMQLSPDGSYLL
TNGMDCKLCIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYI
WDTTSRRILYKLPGHNGSVNECVFHPNEPIIGSCGSDKQIYLGEI
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgcaagtttttccaagtgaaggtgaaagcgctctttcagttgttggtccaaggccaatg
gaatggtctactgttccatataatgcccctcaagctcctgggccaaatggaaagcagcgg
acctcaagtttggaatcaccaatcatgttgctgtcaggtcaccagagtgctatatatacc
atgaagttcaatcctgcaggatcagttgttgcatctggatctcatgacagggaaattttc
ctctggaatgtgcatggggattgcaagaacttcatggttctgaaaggtcacaagaatgca
gttttagatcttcactggactactgatgggacacagataatttctgccagccctgataaa
acagtgagggcgtgggatgtcgaaacaggaaaacaaataaaaaaaatggtagaacatctc
tcatacgttaatgcatgttgtccttctcgaaggggaccacctcttgttgttagtggctcc
gatgatggaactgctaaattatgggatatgcgtcaaaggggttccatccaaacattcccg
gataaataccagattactgctgttggcttctccgatgcatcagataagatcttcaccggt
ggtattgataatgatgtcaagatttgggatttgcgtaaaggtgaagttaccatgacattg
caaggtcatcaagatatgattactggtatgcagttgagtcctgatgggtcgtaccttctt
acaaatggcatggattgcaagctttgcatttgggacatgcgcccatatgctccacaaaat
cgctgtgtgaaggtgttggaagggcaccaacacaactttgagaagaacttgttgaagtgt
ggttggtctcctgatggaagcaaggtaacggctggtagttctgatcgaatggtttacatc
tgggataccacttctcgtcgcatcttgtataagcttcctggtcacaatgggtctgttaat
gagtgtgtttttcatcccaatgagcctatcattggatcttgtggcagtgacaagcagatt
tatctgggggagatatga

DBGET integrated database retrieval system