Vigna radiata (mung bean): 106755385
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Entry
106755385 CDS
T04126
Name
(RefSeq) sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03018
RNA degradation
vra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106755385
09123 Folding, sorting and degradation
03018 RNA degradation
106755385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106755385
03041 Spliceosome [BR:
vra03041
]
106755385
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106755385
mRNA degradation factors
5'-3' decay
Lsm complex
106755385
Spliceosome [BR:
vra03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
106755385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
Motif
Other DBs
NCBI-GeneID:
106755385
NCBI-ProteinID:
XP_014493018
UniProt:
A0A1S3TGW6
LinkDB
All DBs
Position
Unknown
AA seq
99 aa
AA seq
DB search
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDPDDPLKT
TDQTRQLGLIVCRGTAVMLVSPTDGTDEIANPFIQPDGA
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcagaaaagaaacggttctagaccttgccaagttcgtagacaaaggcgttcaa
gttaagcttactggtggaagacaagttacagggactctaaaagggtatgatcagttactt
aacctcgtcctagatgaagcagtggagtttttaagagatcctgatgatcctctcaaaact
accgatcagaccagacaacttggcctaattgtttgtagaggaactgctgtcatgcttgtg
tccccaactgatggtacagatgaaatcgccaacccctttatacagccagatggagcttaa
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