Vigna radiata (mung bean): 106756044
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Entry
106756044 CDS
T04126
Name
(RefSeq) uncharacterized protein LOC106756044
KO
K14311
nuclear pore complex protein Nup188
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106756044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106756044
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106756044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
Motif
Other DBs
NCBI-GeneID:
106756044
NCBI-ProteinID:
XP_014493767
UniProt:
A0A1S3TJ29
LinkDB
All DBs
Position
2:2006411..2027837
Genome browser
AA seq
1962 aa
AA seq
DB search
MADISSVDASLWWDSFTVLLTELENSSLSSDLPPNLAKKLKDNHAWFVDTLSRFKPPNQS
SKEALNSKTLKIGSHQVTVQPHLKDKALQISSILLLDEVQSYIFVERSIKHNDAVADSMA
PEFLHMMLIQYYKERQCLLKCIRWILMHAIHNGPVSEDNTMKEEARKLFHDGLESKLILF
FDNLLSCSYPEQMDVELFTLWAEETLIEDNLVLDILFLAYYDSLCTCSGEIWKKFIALYK
GILAGDYNLGKLAITAETQQLSYHAKVQLLLILIETLNLENVLQMVHDEVPYRKGKSTFS
MTDVQEMDALVSTFNAFEMNEAGPLVLAWAVFLYLLLTLMEKDENNDLTEIDHISYVRQA
FEAGSLRYCLEILECDILKDYDGPMCGYRSVLRTFISAFIASYEINLQPDDGNSTLILDI
LCKIYRGEESLCIQFWDKGSFIDGPIRSLLCNLESEFPFRTVELVQLLSSLGEGTWPAEC
VYNFLNRSLGISSLFEINGDSQIVEAQQVVQVPGVQGLFIPAGTRGHVLRVVGENTALVR
WEYTSSGIFVLLLHLAQEMYLDNKDEVAFTLDMLSRLVSFNTGICFAVMDISNSLQFDAV
GLMNEQVEKRVWAVEIICNLIKKLSLNSGDAALMSMGIKILSIMLICSPSNVAAATLNAN
LFDMTLKTPVLNVGSNGLSSGSWLLSSELARMLSIDCEQNSNDCPLAISVLDFTIQLVET
GVEHDDLLALIIFSLQYVLVNHEYWKYKTKHIRWKITLKVLELMKKCISSTPNYGKMGEI
IRNVLFSDSSIHNTLFQIVCTTSHSLEKLHISRLFDPMEIEGLQLAISSVLDILSVMLTK
LSKDTSVNFPVFLQAVFSCTTKPVPVVTSVLSLISYFQDPAIQYGAVRFISMLFAIADCI
QPFSYGITCFVPDNEIMDLRQSLSYILLEQSVSNEDLFVATVNLFTSAAHYQPSFIVAIF
APEENTKDHLSIGDAKLQKEETSPIHAVFRKPSLIDALVHYIERADDLIKSNPRILLCVL
NFMIALWQGAPQYANLLESLRRHGKFWEHLANAISNISSSEISLPTSLKEKDAFNLAYTF
HCQSSILGIMAYELFLQRKLFHAESTVKDAAESKEKEQNVTRTEKSKATNLHDLKGIWSS
LFNDSILKKLIKSYTSYGNNNDIYNGAKVATSLFSVHVMMKLAVCDSGSLSVLLLQKIHG
ILAKLSIHPAFSELLSQYSQRGYSEGKELKKLILSDLYYHLQGELEGRKIGIGPFKELSQ
YLVESNFLGTYQHQFNEDAFTKNMFTKNVYLFDLAHLREDLRLDVWDCNNWRTSKEVAEV
MLRFLQDANSVMLLSSSKLSALKGLIAVLAVNHDSQGRATAGGRISDELIFTFMDNICQS
FLSNVEILSSVLDASEDILNFLACEVELIFQLTRTVRKSLSLDVSLLVLKCASSGLRLLG
SLKPAPSEANVIMKLLLTLLLSVLQSNSLNAHSGVVTKDNSGEVLSKVSNATLGLLPILC
NCVATSDHCMLSLSVMDLILRSFLTPRTWLPVLQNHLQLPVVMLKLHDRSSTSIPVIMKF
FLTLARVRGGADMLYCSGFLSSVRVLFAESGEDFSTISENLGASCEKFVIPQDIWGLGLA
VVTAMVKSLGDHSSGTTIVDSMIPYFFSEKAHFIFYSLNAPDFPSDDRDKKRPRALRAFI
SLATLKETEHTLMLMCELAKHWNSWIKAIRNVDRQLREKCIHLLAFISRGSQRFGELSSR
NAPLLCPPTLKEDFEISSKPSFVNSKNGWFALSPLGCVPKPKFSSFSTTSTHGQATESTD
LIPKTCFSDTVALQVYRIAFLLLKFLCLQTEGAAKRAEEVGFVDLAHFPELPMPEILHGL
QDQAIAITTELCQANKQRVSPEIQDVCNLLMQILEMALHLELCVLQICRIRPVSGRVEDF
SKEAKSLFSALEGHAFLKASCNSLKQMISCVYPGLLQAENFI
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atggccgatatcagttcggtcgatgcttctttatggtgggactcattcaccgtgctcctc
accgagcttgagaattcctctctgtcctcagatctcccacctaacttggccaaaaagttg
aaggacaaccatgcctggttcgtagacacactgtcgcgcttcaaaccgcccaatcagagt
tccaaggaagctctgaattcaaaaacactgaaaattggatctcaccaggtcactgttcag
cctcacctgaaagataaagcgttgcagattagctccatcctgctactagacgaggttcaa
tcatacatttttgttgaaaggtccatcaaacataacgatgcagttgctgattccatggct
ccggagtttcttcacatgatgttaattcaatattacaaggagcgacagtgcttgctaaag
tgcatcaggtggattctcatgcatgctatacataatggtcctgtgtctgaagataatact
atgaaggaggaggcaagaaaactgtttcacgatggtcttgaaagtaaattaatattattc
tttgacaatcttctgtcctgtagctacccagaacaaatggatgttgagctttttacactg
tgggctgaggagactctaattgaagacaacttggtcttagacatccttttcctggcatat
tatgactcattgtgtacctgtagcggggaaatctggaagaagtttattgctctttacaag
gggatcttagctggtgattataacttgggaaagctagcaattactgcagaaacacaacaa
ttgtcttatcatgctaaagttcagctgctgcttattttaattgaaaccctgaacctggag
aatgttcttcaaatggttcatgatgaagtaccatataggaaaggcaagtctactttttcc
atgaccgatgtccaagagatggatgcactagtttctactttcaatgcttttgaaatgaat
gaagctggtcctctagttctagcttgggcagtatttctctatctgctcttgacacttatg
gaaaaagatgaaaacaatgacctaacggagattgatcacattagttatgtccgtcaagcc
tttgaagctggatcgctgcgatattgtcttgaaattctggaatgtgacattttgaaagat
tatgatggcccgatgtgtggatatcgcagtgttttgaggacattcatttctgcattcatt
gcatcttatgaaatcaaccttcagcctgatgacggtaactccactctaatactggatatt
ctatgcaagatttatcgtggagaggaatcattatgtattcagttttgggacaaggggagt
tttattgatggtccaattcgatctcttctttgcaacctagagagtgagttccctttcagg
actgttgaacttgttcaactcctgtcatcccttggtgaaggaacttggccagcggagtgt
gtgtataactttctaaataggtctcttggtatatcatctttgtttgagattaatggtgat
tcacagatagttgaagcacaacaggtagtgcaagttcctggggttcaaggtctctttatt
ccagctggaactcgtggccatgtcttgagagttgttggagagaatactgcccttgtacga
tgggagtatacatcatctggaatattcgtattactcttacatttggcccaagaaatgtat
ttggataacaaggatgaagttgcttttacacttgacatgcttagtagattggtgtccttt
aatactggtatttgctttgctgtgatggacatcagcaactctttgcaatttgatgctgtt
gggttgatgaatgagcaggttgaaaagagggtctgggcggttgagataatttgcaattta
attaaaaaactgtctctgaattccggtgatgctgcacttatgtcaatgggtatcaagatt
ttatccattatgttgatttgttctccatctaacgttgcagcggctactctaaatgcaaac
ctgtttgatatgactttgaagacacctgtgttgaatgtaggcagtaatggcttatcaagc
gggtcatggttgctttcttctgaacttgctaggatgctttcaatagactgtgagcaaaac
agtaatgactgccccttggcaatatcagtgctggacttcaccatacagcttgtagaaaca
ggagtagagcatgatgatctgctggcattgataattttctctttgcagtatgttctagtc
aatcacgaatattggaaatacaagacgaagcatattagatggaaaataacacttaaggtg
cttgaattgatgaaaaaatgcatttcatcaacgcctaattatggaaaaatgggtgagatc
atacgcaatgtgttattctctgattcttccatccataacacattattccaaattgtttgc
acaacttcacattctttggagaaattgcatataagccgcctctttgatccaatggaaatt
gaaggattacagcttgctataagttctgttttagatattctttcagtcatgttgaccaaa
ctttccaaggatacttcagtgaactttccagtttttctccaagcagttttctcttgcaca
accaaaccggtccctgttgtcacttctgtcttgtccctgatttcatactttcaagatccg
gccatccaatatggagctgttaggtttatttcaatgttatttgccatagccgattgtatt
caaccattttcatatggaatcacatgcttcgttcctgataatgagatcatggatttgagg
caatctctgagctacatacttcttgagcaatcagtgtcaaatgaagatctatttgttgcc
actgttaatctgtttacttctgctgcacattaccagccttctttcattgttgctatcttt
gctccagaggagaacacgaaagaccacttgagcattggtgatgcaaagctgcaaaaggag
gaaacctctcctatacatgcagtttttagaaaaccaagtcttattgatgcacttgtgcac
tatattgaaagggcggatgatctgatcaagagcaatccccgcatactgctttgtgtactt
aacttcatgattgccttatggcaaggggctccccagtatgccaatctcttggagtcctta
agaaggcatggaaagttctgggaacacttagctaatgcaatctcaaatatttctagcagt
gaaatttccttgcccacaagcctgaaagaaaaagatgctttcaatctggcatacactttc
cattgccagtcttcgatactagggatcatggcatatgaactattcttgcagagaaagttg
tttcatgcagagtccactgtgaaggatgcagcagaatctaaggagaaggagcaaaatgtc
acaagaactgagaaatctaaagccacgaatcttcatgatcttaagggaatctggtcttca
ttgttcaatgattccattttaaagaaactaataaagtcgtacacttcgtatggaaataat
aatgatatatataatggtgcaaaggtggccaccagtttattctctgttcatgtgatgatg
aaattagcagtttgcgactctggaagtttatctgtgttattgcttcagaagattcatgga
attctggctaagttgagcattcatcctgctttttctgaattgctgtctcagtattcacaa
cgtggttacagtgaaggtaaggaactaaagaaattgatactcagtgacctctattatcat
ttgcaaggagagcttgaagggagaaaaattggtattggaccgttcaaagaattatctcag
tatcttgtcgaatcaaactttttgggaacctatcaacaccagttcaatgaagatgctttt
acaaagaatatgtttacgaagaatgtatacttgtttgaccttgctcacttgcgagaagat
ttgagattagatgtgtgggattgtaataattggagaacatccaaggaggttgcagaagtc
atgttgcgtttcctgcaagatgcaaactcagtcatgttgctttcaagttcaaagctttct
gcattaaaaggattgatagctgttttggctgtcaaccatgattcacaagggagggctaca
gctggagggaggatctcagatgaactcatatttactttcatggataatatatgccaatct
ttcctttctaacgtggagatattatcatctgttctagatgcctctgaggatattctcaat
tttcttgcatgtgaagtagaactaatcttccagttgacaagaactgtcaggaaaagcctc
tcactagatgtatccctacttgttttgaaatgtgctagttcgggtcttagactattgggt
tcacttaagccggcaccttctgaggctaatgtgatcatgaaacttttactcacattgctg
ctttcagtattacagtccaactcccttaatgcacactcaggtgtggtaaccaaggataat
tctggtgaggtcttatcaaaggtttcaaatgcaaccctgggtctactacccattctttgc
aactgtgttgcgacttctgatcattgcatgctatccctgtcagtcatggatttaatactg
agaagcttcttgacacccaggacttggttacctgtcctgcagaatcatctccaattgcca
gtagttatgcttaaactccacgatagaagttcaacttctattccagtaataatgaagttc
tttttgacccttgcacgagttagaggaggtgctgatatgctttattgttccggctttttg
tcatctgtgagagtgttatttgcagaatctggtgaggatttctcgaccattagcgagaat
cttggggcctcgtgcgagaagtttgtaataccccaggatatttgggggcttggattagct
gtggttacagccatggttaaatccttgggagaccattcttctggaactactattgtggat
agcatgataccttactttttttcagagaaagctcattttatcttttattctctaaatgcc
ccggactttccttctgacgatcgtgacaagaaaagacctcgagcactgagggcatttata
tctttagctacacttaaagaaacagaacatactttaatgctcatgtgtgagctagcaaaa
cattggaattcgtggattaaggcaatacgaaatgtggatagacagcttagagagaagtgt
atccatcttttagccttcattagcaggggatctcaacgctttggtgaattgtcaagcagg
aacgccccacttttatgtccacctaccctgaaagaggattttgaaatttcctcaaaacct
tcctttgtcaatagcaaaaatggatggtttgctctttcaccacttggatgtgtgccaaaa
ccaaagttctcttctttctcaaccacttctacccatggccaagcaactgagagtactgat
cttattccgaaaacgtgcttctctgatactgtagccctgcaggtatatagaatagcattt
cttcttttaaagtttctctgtttacaaactgagggtgctgctaaaagggctgaggaggtt
gggtttgttgatcttgcacattttcctgagctgccaatgccagaaatcttgcatggatta
caggatcaagctattgccattactacggaactctgtcaagccaacaaacaaagggtctct
ccagaaatacaggatgtttgcaacttactgatgcaaatacttgaaatggccttgcacttg
gaactttgtgttctacaaatttgtcgcataagacctgtatcggggcgtgtggaggatttc
tcaaaggaagcaaagtctctgtttagtgcactggaaggtcatgcttttctaaaagcatct
tgcaactctctaaaacagatgatatcgtgtgtctatcctggattgttgcaagcagagaat
ttcatataa
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