KEGG   Vigna radiata (mung bean): 106756208
Entry
106756208         CDS       T04126                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
vra  Vigna radiata (mung bean)
Pathway
vra03030  DNA replication
vra03410  Base excision repair
vra03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106756208
   03410 Base excision repair
    106756208
   03420 Nucleotide excision repair
    106756208
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vra03032]
    106756208
   03400 DNA repair and recombination proteins [BR:vra03400]
    106756208
Enzymes [BR:vra01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     106756208
DNA replication proteins [BR:vra03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    106756208
DNA repair and recombination proteins [BR:vra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      106756208
SSDB
Motif
Pfam: DUF1744 DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 106756208
NCBI-ProteinID: XP_014494011
UniProt: A0A1S3TJT2
LinkDB
Position
2:7608359..7637207
AA seq 2225 aa
MSGDGRRRDRRDNRASKKRKLNRNPEDELEAKLGFDLFSEGEKRLGWLLTLASSSVQDEN
SYKEYSCVDLYFVTQDGSSFKSKFRFRPYFYVATKVGENIHDKMEMDVEAYLRRRYEGRI
ADIEIIEKEDLDLKNHLSGLRKSYLKLSFDTVQQLMDVKRDLMPTVERNKAKSDTAEAFV
SMSTERREHRPQDFLDCLTDLREYDVPYHVRFAIDNDIRCGQWYDVGVSNNGVTLEKRTD
LLQRAEVRVCAFDIETTKLPLKFPDADYDLVMMISYMVDGQGYLIINRECVGDDIEDIEY
TPKPEFEGCFKVTNVQNEIELLRLWFSHMQEVKPGIYVTYNGDFFDWPFLERRATHLGFK
MSDELGFKCDTNQGECRARYACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPVEVHP
EDMVRFAKEKPQMMASYSVSDAVATYYLYKTYVHPFIFSLATIIPMPPDEVLRKGSGTLC
EMLLMVQAYKANVICPNKHQSDTEKFYNNHLLESETYIGGHVECLESGVFRSDIPSSFTL
EPSAFQQLINNLDRDLQYAITVEGKMDLESVSNYDEVRNAIMEKLVNLRDVPTREECPLI
YHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGETFIAKKSD
YYALKTQIESEFVDDSENNKSLPRYSEKRSSKSFLDLPKSEQKSRLKDRLKKYCQKAYKR
VLDKPVTEIREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSMKIQ
EAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEK
IGKPLELDTDGIWCALPGSFPENFTFKTKDPKKKFTISYPCVMLNVDVAINNTNDQYQTL
TDPIRKTYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEI
KRRGELKLIKVFQAELFDKFLHGSSLEECYSAVASVANRWLDLLDNQGKDIADSELLDYI
SESSTMSKSLADYGEQKSCAVTTAKRLADFLGDTMVKDKGLRCQYIVASEPKGTPVSERA
IPVAIFETDAEVMKFYVRKWCKVSLEVAIRSIIDWSYYKQRLSSAIQKIVTIPAAMQKVS
NPVPRVAHPDWLHKKVREKEDKFRQRKIVDAFKSMNKNKHSEKHNDSNCVSLVMDDEILN
ELEDFGNKGRSSTYGPRPIIRHYEANNEQNSRKLSDQQDLEQEHSKHNSSKKNLPSPLQQ
DEAYEKVDRNVDYQGWLQVKKRMWKNILERRKKQRLEKSKISNRMNGVSEQMNGKRNLGR
SHVSSYLKRLEVDLTKCHWQIIQLVPSSLIGQFFAWVVVDGSMHKIPVSVPRVFYLNSRS
PITEEFMGKRVNKNLPHGRLNYNLYEVSISEIQYGEVSKKLATLLADPDIEGIYETKVPL
EFNAIIQLGCVCKVDKTANKRTLHEPWNLSELHMKTTTECVYLEQSLSFFYLYHSISEGR
AIYVGYFPASKAITVVVVNPYQNKDLLPTFLERQFHDACQALSIEPPPRNDINFKVDYVA
HVKDAETLMQRAINSHSHGRENHVPMVAVTECPNVQLVKLGIRALDDFPCLSVPYNARDS
QYQILGWQQTAGKVGMQRCAASVQWLNERIALSRYAHVPLGNFELDWLIFMADIFFSRAL
RDNQQVLWISDDGLPDLGGINGEQNFFVDEVQQPVLTYPGAYRNVTVELKIHHLAVNALL
KYSLVNEMEGGTLLGFVHEHDSGAFSMNDQNGFDESTSCAHAFRVLKQLIQRCLADAVTS
GNVYADSILQHLYRWLCSPKSKLHDPALHQLLHKVMQKVFALLLAEFRKLGATIVFANFT
KIIIDTGKYDLSRAKAYCDSLLRTIQSRDLFEWIELEPLQFWCSLLFMDQYNYGGIPVKS
DEAMNDKSQVDIISSWNIAEYLPKKVQDHFVFIVSQFMYIPWNYAQNQAQIRASFQDGDT
CTPSISIGAAAAFESEITEYIKEQISSYFADKLLGIVHDISRHMKGVSKSENNQSISPGP
ELHRGDAALEFIKHVCAVLALDQSVQHEVLVLRKNLLKYVGVREFAPEAEFHDPCHSFVL
SNVICSYCNDCRDLDLCRDSALLTEEWRCAVPQCGQPYDREVMENALLQTVRQRERLYHL
QDVVCIKCHQVKAAHLAEQCACAGSFSCKEDANEFRRKMQVFFNIASRQKFQLLLECTSW
ILELR
NT seq 6678 nt   +upstreamnt  +downstreamnt
atgagcggcgatggtcgacgacgtgaccggagagataacagagcatcgaaaaagcggaag
ctgaaccgcaaccccgaggatgaactcgaagctaaattagggttcgatctgttttcagag
ggtgaaaagcggctcggatggctactcactcttgcatcctcatctgttcaggatgaaaac
agttacaaagaatacagttgtgtcgatctttactttgttacacaggatggctcttcattc
aagtcaaaattcagatttcggccttacttctatgtagctacaaaggtaggcgagaacatt
catgataaaatggagatggatgttgaagcatacctgagaagacgttacgaaggtcggatt
gctgatattgaaattatagagaaagaagacctggatcttaaaaatcatttatcaggatta
agaaaatcttatttaaagctttcatttgatactgtgcaacaattgatggatgtgaagaga
gatctgatgcctactgttgaaagaaataaggctaagtctgacactgcagaagcctttgta
tccatgtcaacagaaagaagagaacatagacctcaggactttctagattgcttgactgat
cttcgagaatatgatgttccttatcatgttcgctttgccattgacaatgatatacggtgt
ggccagtggtatgatgttggagtgtccaataacggggttacacttgaaaagaggacagat
cttctgcagcgtgctgaagttcgagtttgtgcatttgacattgagaccacaaaacttcca
ttgaagtttcctgatgctgactatgatttagttatgatgatttcgtacatggtagatggt
caggggtatttaatcataaatagggagtgtgtcggggatgatatagaggatatagagtac
actccaaaaccagagtttgaagggtgttttaaagtgacgaatgttcaaaatgagattgag
cttcttagattgtggttctctcatatgcaagaggtgaaacctggtatctacgtgacgtat
aatggtgatttttttgattggccattcctagaacgaagggcaacccatcttgggttcaaa
atgagtgatgaattggggttcaaatgcgacacaaaccaaggggaatgtcgtgccagatat
gcttgccatttggattgttttgcttgggttaaacgtgatagttatctccctcaggggagc
caaggcttgaaggctgttacaaaagcaaagttgggatatgatccagtggaggtgcatcct
gaagacatggttcgatttgcaaaggaaaagcctcagatgatggcctcctattctgtttct
gatgcagtggcaacttattacttatataaaacttatgttcatccctttatattctctctt
gcaactattatacctatgccacccgacgaggttttgcgcaaaggtagtggaaccctatgt
gaaatgttgcttatggtgcaggcatacaaggccaatgttatatgccctaacaaacaccag
tctgatacagagaagttttataataatcatcttcttgagagtgagacgtacattggtggt
catgtggaatgtcttgaaagtggtgtattcagatctgacatcccatctagttttacatta
gagccatctgcttttcagcaactaatcaacaaccttgatcgagatctacagtatgctata
acagtggagggcaagatggatttggaatctgtttctaattatgatgaagtacgaaatgca
atcatggaaaagcttgtaaacttacgagatgtgccaacacgtgaagaatgtcccctcatt
tatcacctggatgtagctgctatgtatccaaacataattttaacaaaccgacttcagcca
ccatcaattgttaccgatgaagtctgcactgcatgtgattttaatcgtcctggaaagact
tgcctacgtaagcttgagtgggtttggcgtggagaaacattcattgcaaagaaaagtgac
tactatgctttaaagacacaaatagaatcagagtttgttgatgattctgagaacaacaaa
tccttaccccgctattctgagaagaggtcatcgaaatcctttcttgaccttcccaagtca
gagcaaaaatcaagactgaaagatcgtttaaagaaatactgccagaaggcatataagcgg
gtacttgacaaacctgttactgaaattcgtgaagcaggaatctgcatgcgggaaaatcca
ttttatgttgacactgttcgcagtttccgggatagaagatacgaatataaaggtctcaat
aaggtctggaaggggaaattgtcagaggccaaggctagtggaaattctatgaagatccaa
gaagcacaggatatggttgtgctttatgattcattgcaacttgctcacaagtgtatactt
aattccttttatggatatgtcatgcgcaagggtgcaagatggtattctatggaaatggct
ggagtagtgacatatactggtgcaaaaataattcaaaatgcccgcttgctagtagaaaaa
ataggaaaaccacttgaactagatacggatggtatttggtgtgcactacctggatctttt
ccagaaaatttcacttttaaaacaaaagacccaaagaagaagttcacaatatcataccct
tgtgttatgcttaatgttgatgtggcaataaataatacaaatgatcaatatcagacactc
acagatccaatcaggaaaacttatacaactcatagtgaatgctctattgaatttgaggtg
gatgggccatacaaggcaatgatccttcctgcttccaaggaagaaggaattttgattaag
aagcgatatgctgtttttaatgatgacggaactcttgcagagcttaaaggttttgagatc
aagcgcagaggtgaactgaagctaatcaaagttttccaggctgaactttttgacaagttt
ctccatggttcatcattagaagaatgctattcagctgttgcttcggtggcaaaccgctgg
cttgatcttcttgataaccagggaaaggatatcgcagacagtgagttgcttgattatata
tcagaatcaagtaccatgagcaaatctttagctgattatggtgagcagaagtcttgtgct
gttaccactgctaagcgtctagctgactttcttggagatacaatggtcaaagataaaggt
cttcgatgtcagtacatagttgcaagtgaaccaaagggcacaccagttagtgagcgtgct
attcctgtggcaatatttgaaactgatgctgaggtaatgaagttctatgtccgaaaatgg
tgcaaagtttcattggaagttgccattcgttcgataattgattggtcctattacaagcag
cggcttagttctgcaattcaaaagattgtcactattcctgctgcaatgcaaaaggtttca
aaccctgtccctagggtagctcatcctgattggttgcacaaaaaggttcgtgagaaggag
gacaagtttcgccaacggaaaatagttgatgcctttaaatcaatgaacaagaacaagcac
tcagaaaagcataatgactcaaattgtgtctctcttgtgatggatgatgagattcttaat
gagttagaggactttggaaacaagggtaggagttctacatacggacctagaccaattata
aggcattatgaagctaataatgaacaaaattcaaggaagctcagtgatcaacaagatttg
gagcaagagcatagtaaacataatagcagcaagaaaaatctaccttcaccattacaacaa
gatgaagcttatgaaaaggtagacagaaatgtagattatcagggatggcttcaagtaaag
aagcgaatgtggaaaaatattctggaaagaagaaagaagcaaagattggagaaatcaaag
atatctaatcgcatgaatggtgtttctgaacaaatgaatggtaagaggaatctaggaaga
agtcatgtcagttcatatcttaaaaggcttgaggtagacttaacgaagtgtcattggcag
ataatacaattagttcccagttcactgataggccaattttttgcttgggtggttgttgat
gggagtatgcataagattcctgtttctgttcccagagtcttttacctcaattcaagatct
ccaattactgaagaatttatgggtaaacgtgttaacaagaatcttcctcatggaaggctg
aattataacttatatgaggtctcaattagtgaaattcaatatggggaagtaagcaaaaaa
cttgcaactcttctagcggatcctgatattgaggggatatatgaaactaaggtgccactg
gagtttaatgctataatccagcttggttgcgtatgtaaggtggacaaaactgctaataaa
cgtactctgcatgaaccatggaatttgagtgaattgcacatgaagactacgacagaatgt
gtttatcttgaacagtctttatccttcttttatttgtaccacagcatctctgagggacgg
gctatatatgttggatattttcctgcatcaaaagcaataactgttgtggtggttaatccc
tatcaaaacaaagatttattaccgacttttcttgaaagacaatttcatgatgcttgccag
gctttgtctattgagccacctccgaggaatgacattaattttaaggtggactatgtcgca
catgtcaaggatgctgaaacattgatgcaaagagcaataaatagtcacagtcacggaagg
gaaaatcacgtgcctatggttgctgtcactgaatgccctaatgttcaattggtaaaattg
ggcatccgtgctcttgatgattttccatgcctgagtgttccttataatgcacgtgatagt
cagtaccagattcttggatggcaacaaactgctggtaaagttggaatgcaacgttgtgct
gcatcagtccaatggttaaatgaaagaattgctctctcaagatatgcccatgtacccctg
gggaactttgaacttgactggctcatatttatggcagatatcttcttttcaagagcattg
cgtgataatcaacaggttctttggatatctgatgatggccttccagatttaggtgggatt
aatggcgaacagaacttttttgttgatgaggtccaacaacctgttcttacatatcctgga
gcttatagaaacgtaaccgtggagttaaagatacaccacctggctgtaaatgctctactc
aaatacagcctagttaatgaaatggaaggaggcactctattaggatttgttcatgaacat
gattctggagcattttctatgaatgatcagaatggttttgatgagtctacctcttgtgca
catgcctttcgagtccttaagcagttgatccagcggtgcctagcagatgcagtgacatca
ggaaatgtttatgctgattcaattttgcagcatctgtacagatggctttgcagccctaaa
tcaaaacttcatgatccagctctccaccagctactccacaaggtcatgcaaaaggtcttt
gcattgctgttggcagagtttcgcaagttaggtgctacaattgtatttgcaaacttcacg
aagattattatagacacagggaaatatgatttgtctagagctaaagcttactgtgacagt
ttgctaagaactatacaatctagagatttatttgaatggattgagcttgaaccactacag
ttctggtgctcgttgctattcatggatcagtataactatggtggaataccagtaaaatct
gatgaagccatgaatgataaatcccaagtagacattatatcaagctggaacattgctgaa
tacttgccaaaaaaagtccaagaccattttgttttcatcgtttctcaattcatgtatatt
ccctggaattatgcacaaaaccaagcacaaatcagggcctcatttcaggatggtgacacc
tgtactccatcaataagcattggagctgcagctgcttttgaatcagaaataacagagtat
atcaaagaacagattagctcttactttgcggacaaactgctgggaattgttcacgatatt
agtcgtcatatgaagggggtgagcaaatcagaaaacaaccagagtatatcaccaggccct
gaattacatagaggggatgctgccttggaatttatcaagcatgtctgtgctgtcctggct
cttgaccaaagtgtgcagcatgaagttttggtgttgagaaagaatttgctaaaatatgtt
ggtgttagagagtttgctcccgaagccgagtttcatgatccttgtcattcattcgtctta
tccaacgtcatatgcagctattgtaatgactgcagagacttggacctgtgccgggattcg
gctttattaactgaggagtggcgttgtgctgtgccacagtgtgggcagccttatgaccgt
gaggtgatggaaaatgctcttcttcagactgtgagacaaagagaacgactataccacctg
caagatgtggtgtgtatcaagtgccatcaggtgaaagctgcacatttggcagaacaatgc
gcatgtgcaggctcgtttagttgcaaggaagatgcaaatgaatttcgcagaaagatgcag
gttttctttaacatagcatctcgtcaaaaattccagcttctcctagagtgtacctcttgg
attttagaacttagatag

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