Vigna radiata (mung bean): 106756242
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Entry
106756242 CDS
T04126
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
vra
Vigna radiata (mung bean)
Pathway
vra04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
106756242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vra04131
]
106756242
Membrane trafficking [BR:
vra04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
106756242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
zf_RING_Vps8
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_HPS5
WD40_Prp19
Beta-prop_EML_2
WDR55
zf-RING_2
zf_RING_Vps8_fungal
Beta-prop_WDR11_2nd
EIF3I
PEP5_VPS11_N
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
106756242
NCBI-ProteinID:
XP_014494066
UniProt:
A0A1S3TJY6
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All DBs
Position
2:7142508..7161031
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AA seq
952 aa
AA seq
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MAPFPSENGVEGDDEREEEDEEEEDEEEVEDEEDEEEPRLKYQRMGGSIPSLLASDAASC
IAVAERMIALGTHGGTVHILDFLGNQVKEFSAHASVVNDLSFDTEGEYIGSCSDDGSVVI
NSLFTDEKLKFDYHRPMKAVALDPDYAKKMSRRFVAGGLAGHLYLNSKKWLGYRDQVLHS
GEGSIHAVKWRASLVAWANDAGVKVYDTANDQRVTFIEKPRGSPRPELLLPHLVWQDDTL
LVIGWGTSVKIASIRTIRAANGSFRQVPLSVVAQVDIVASFQTSYFISGLAPFGDALVVL
AYIPGEDGDKDFSSSAPSRQGNAQRPEVRIVTWNNDELSTDALPVHGFEHYRAKDYSLAH
APFSGSSYAGGQWAAGDEPLYYIVSLKDVVIAKPRDTEDHIAWLLQHGWHEKALAVVESG
QGRSELLDEVGSRYLDHLIVERKYSEAASLCPKLLRGSAPAWERWVFHFAHLRQLPVLVP
YMPTENPRLRDTAYEVALVALATNSSFHKDLLSTVKSWPSVIYSALPVISAIEPQLNTSS
MTDSLKEALAELYVINGQYEKAFLLYADLMKPEVFDFIDKHNLHDAIRGKIVQLMMLDCK
RAVTLLIQNRDLISPPEVVKQLLKADDKSDRRYFLHLYLHSLFEVNPHAGKDFHDMQVEL
YADYDPKMLLPFLRSSQHYTLEKAYEICIKRDLLREQVFILGRMGNSKQALAVIINHLGD
IEEAVEFVTMQHDDELWEELIKQCLHKPEMVGILLEHTVGNLDPLYIVNKVPNGLEIPRL
RDRLVKIITDYRTETSLRHGCNDILKADCVNLLIKYYNEARHGVSLGNEEDETRVKMSDT
RASQVFDKSLSLRTMEMKSKTRGGGRCCICFDPFSIQNVSVIVFFCCHGYHTTCLMDSSY
TSSNKKETTSLEAGMYNGYNGYEDDASDDIEDEETKSGGPRMRCILCTTASS
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggctccgtttccgtctgagaacggcgtcgaaggagacgacgagagagaagaggaagat
gaagaagaagaagacgaagaagaagtggaagatgaagaagacgaagaggaaccgaggctc
aagtaccagagaatgggaggtagcataccttctctgctagcgagtgacgccgcgtcatgt
attgccgtcgccgagcggatgatcgctctcggcactcacggcggcaccgttcacatcctc
gattttctcggtaatcaggttaaggaattctccgcacatgcttctgttgtcaacgacctt
agctttgatacagaaggtgaatatattggaagctgttctgatgatggatcagttgtgata
aacagccttttcactgatgagaaattaaagtttgattaccatcggccaatgaaggcagtt
gccttggatcctgattatgcaaagaaaatgtccaggagatttgttgctggaggtttggct
ggtcatttatatttgaattcaaagaaatggctgggctaccgtgatcaggttttgcactct
ggtgaaggttcaatacatgctgtgaaatggagagcaagtcttgttgcttgggctaatgat
gcaggagtgaaggtttatgatactgccaatgaccagcgtgtgacatttattgaaaaacca
cgagggagcccacgccccgagcttttacttcctcacctggtctggcaggatgataccctt
ttggtaattggatggggaacatctgtcaaaattgcttcaataaggacaataagggcagcg
aatgggtcgttcaggcaggttcctttgtctgttgtggcccaggtggatatcgtagcatct
ttccaaaccagctatttcatctcagggcttgctccctttggtgatgctttggttgttctt
gcatatattcccggagaagatggagataaggattttagtagctcagctccttcacggcag
ggcaatgcacaaagaccagaagtaagaatagtaacatggaacaatgatgagctttcaact
gatgctctgccagtacatgggttcgagcattacagagcgaaagactactctcttgctcat
gctcccttctcaggtagcagttatgctggtggtcagtgggctgcaggtgatgaaccactt
tactatattgtatctctgaaggatgtagttattgccaagccaagggatactgaagatcat
attgcgtggcttcttcagcatgggtggcatgaaaaagcattggctgtggttgaatctggg
cagggacgaagtgaactactggatgaggtgggatctaggtaccttgatcatctgattgtg
gaaagaaaatacagtgaagcagcatctctgtgtcccaagttgcttcggggatcagctcca
gcttgggagagatgggttttccattttgcacatcttcgtcaactccctgttttagttcct
tacatgcctacagaaaaccccagactacgtgacactgcttatgaggttgctcttgttgca
ttggctacaaattcttcttttcataaggatctcttgtccactgtaaaatcctggccttct
gtaatttattctgcattacctgtaatttcagccattgaacctcagctaaatacttcgtcc
atgactgattcacttaaggaggcactggcagagttgtatgtaatcaatgggcaatacgag
aaggccttcttgttgtatgccgatcttatgaaaccagaagtatttgattttattgataaa
cataacctacatgatgcaattcgtggaaagattgttcaattaatgatgctagattgcaag
cgtgcagttactttgttgatccaaaatagggacttaataagtccacccgaagttgtgaag
caacttctaaaggctgatgataagagtgatcgtagatattttttgcatttatatcttcat
tcattatttgaagtaaatcctcatgccgggaaagacttccatgatatgcaggtagaactc
tacgctgactatgatccaaagatgctactaccttttctccgtagcagtcaacactacacc
cttgagaaggcttatgaaatttgcattaaaagggacctattgagggagcaagtcttcatt
ctaggaaggatgggaaactcaaaacaagccctagctgttattataaaccatttgggggat
atagaggaggctgtagagtttgtcaccatgcagcacgatgatgaactttgggaagaattg
atcaagcaatgccttcacaaacctgaaatggtgggcatattgttggagcacacggttgga
aatctggatcccctttacattgtaaataaggttcctaacgggttggaaatacctcggctc
cgggatcgactggttaagattatcactgactacaggaccgaaacatcactcagacatggg
tgcaatgatatccttaaggcggactgtgtcaatcttttaataaagtattacaacgaggca
aggcatggagtttctttaggtaatgaagaagatgagacacgagttaaaatgagtgacact
cgtgcttctcaggtatttgacaaatccctgagtctgagaactatggagatgaagtcaaag
actaggggaggtggaagatgttgtatatgttttgatccattttctatacagaatgtatcg
gtcattgttttcttttgctgtcatggttatcatacaacttgtctcatggattcctcttac
actagtagtaacaagaaagaaaccacgtccctagaggcaggaatgtataatggttacaat
ggttatgaggacgatgctagcgatgacattgaagatgaagaaaccaagtcgggtggccca
cgaatgcgctgtatattgtgtactactgcttctagttga
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