KEGG   Vigna radiata (mung bean): 106756524
Entry
106756524         CDS       T04126                                 
Name
(RefSeq) histone deacetylase 9 isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
vra  Vigna radiata (mung bean)
Pathway
vra03082  ATP-dependent chromatin remodeling
vra03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:vra00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    106756524
   03083 Polycomb repressive complex
    106756524
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:vra03036]
    106756524
Enzymes [BR:vra01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     106756524
Chromosome and associated proteins [BR:vra03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     106756524
   HDAC complexes
    Sin3A-HDAC complex
     106756524
    BRAF-HDAC complex
     106756524
    REST complex
     106756524
    SHIP complex
     106756524
    MiDAC complex
     106756524
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     106756524
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    106756524
  Chromatin remodeling factors
   NuRD complex
    106756524
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 106756524
NCBI-ProteinID: XP_014494472
UniProt: A0A1S3TL31
LinkDB
Position
2:complement(7528306..7534590)
AA seq 429 aa
MRSKDRIAYFYDGDVGSVYFGAKHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHLFLNELTKYNLGEDCPVFDNLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDLFFPGTGDAKEIGEREGKFYAINVPLKDGIDDLSFTRLFKT
IISKVVETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHSECVSFVKRFNLPLLVTGGGGY
TKENVARCWTVETGVLLDTELPNEIPENDYIKYFAPEFSLKIPNGQIENLNSKSYLSTIK
MQVLENLRCIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERIDQHSQDKHIQRDDEYYEAD
NDNDQMDVS
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgcgctccaaggacagaatcgcatacttctatgacggcgatgttggtagtgtttacttt
ggtgcaaagcatccaatgaagccacaccggctttgcatgactcatcatcttgttctctca
tatgaccttcataagaaaatggagatttatcgtccacataaggcttatcctgttgagctt
gcccagtttcactcggctgattatgttgagtttttgcacaggattacgccagacactcag
cacttgttcttaaatgaactgacgaaatataatcttggagaagactgccctgtatttgac
aacttgtttgaattttgtcagatttatgctggcggaactatagatgctgcacgtcgattg
aacaaccaactttgtgatatcgctataaactgggctggtggacttcaccatgccaagaaa
tgcgaggcatctgggttttgttacatcaatgacttggttttaggaatcttggagcttctt
aaatatcatgcccgtgttttgtatattgatatagatgtgcaccatggtgatggcgtagaa
gaagccttctacttcactgatagggtgatgactgtcagttttcataagtatggagacctg
ttcttcccgggtactggtgatgctaaggaaataggagaaagagaaggaaagttttatgcg
ataaatgtcccactgaaggatggaatagatgaccttagcttcacacgacttttcaagact
attatttccaaagtagttgaaacatatcaacctggtgcaatagttctccagtgtggagca
gattcgcttgctggagatcgcttgggttgcttcaatctctctattgatggtcactccgaa
tgtgttagctttgtaaaaagattcaatttgccattgctggtcactggaggtggaggatac
acaaaagaaaatgttgctcgatgttggactgttgaaacaggagttcttctagatacagag
cttcctaatgagattccggaaaatgattatattaaatattttgcaccagaattctctttg
aagattccaaatgggcagatagaaaacctaaatagtaaatcatatcttagcactattaaa
atgcaagtcttggaaaatcttcgttgcatccaacatgctccaagtgttcaaatgcaggag
gtccctcctgacttctacattccagatttcgatgaagatgagcagaaccctgatgagcgt
attgatcagcactctcaagacaagcacatccagcgcgatgatgaatattatgaagctgac
aatgacaatgatcaaatggatgtttcatga

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