Vigna radiata (mung bean): 106757294
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Entry
106757294 CDS
T04126
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106757294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106757294
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
106757294
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
106757294
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Imm58
Motif
Other DBs
NCBI-GeneID:
106757294
NCBI-ProteinID:
XP_014495418
UniProt:
A0A1S3TNQ7
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Position
3:complement(799726..801609)
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AA seq
325 aa
AA seq
DB search
MRGIQLPLTQTQKVRLQKTLEQLESLSSKVNSDASVIIADSIPVNHEDGVLKGHGTADLN
GEVVATLCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVAEVAQKRWRLDINFNQDAVLM
LSSMNMPDGVQRRRTALDELNMRCIFEENDVVCAEVRGFQHDGLHLQARSRKYGKLNRGQ
LLTVPPYLVKRQKQHFHHLEEFGVDLILGCNGFIWVGEHIEAKDDMVEDQVSQSDPQVLL
HNSSSLEEQEKNYTILEIRKYICRAANAVRVLSILGFNITLEIIKGIIDLSLSMNLDIHE
MLGSEFCVLVAEKEAERRSSNKKKR
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaatacagttaccgttaacccaaactcaaaaggttcgtcttcagaagactcta
gaacagttagaatctctatcgtccaaggtcaattccgatgcttccgtcatcatcgctgat
tccattcccgtcaaccacgaagacggagtcctcaagggacacggaaccgccgatctcaac
ggcgaagtcgttgccaccctctgcggcgtcgttgagcgtgtcaacaaacttgtatacgtc
cgcgcgttacgctccaggtataagcctgaggttggtgacattgttataggacgtgttgct
gaggttgctcagaagcgctggagactggatataaatttcaatcaggatgcagttttgatg
ctttcttctatgaatatgcccgatggggtccagaggcggaggacagcgctggatgagcta
aacatgcgttgcatttttgaggagaatgatgttgtctgtgctgaagttcggggtttccag
catgacgggttacaccttcaagcaaggagtcggaaatatggaaagcttaatagaggtcag
ttgcttacagtcccaccttatctagtgaagagacagaaacaacacttccatcatctggag
gagtttggtgttgatttgatacttggctgtaacggattcatatgggttggggaacatatt
gaagccaaagatgacatggtagaagatcaggtgagccaatccgatccacaagttttactg
cataacagctcaagtcttgaagaacaagaaaaaaattatacgatattggagatcagaaaa
tacatttgcagagcagctaatgctgttagagttctatcaatcttaggcttcaatattaca
ttggaaatcatcaagggaattattgatctaagcctatctatgaatcttgatatacatgag
atgcttggttctgaattctgtgttctggttgctgaaaaagaggcagaaaggaggagctca
aataaaaagaagcggtag
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