Vigna radiata (mung bean): 106757334
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Entry
106757334 CDS
T04126
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03018
RNA degradation
vra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106757334
09123 Folding, sorting and degradation
03018 RNA degradation
106757334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106757334
03041 Spliceosome [BR:
vra03041
]
106757334
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106757334
mRNA degradation factors
5'-3' decay
Lsm complex
106757334
Spliceosome [BR:
vra03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
106757334
Complex C
U2 snRNP components
106757334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF150_C
DUF1256
Motif
Other DBs
NCBI-GeneID:
106757334
NCBI-ProteinID:
XP_014495462
UniProt:
A0A1S3TP13
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All DBs
Position
3:867651..869823
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AA seq
93 aa
AA seq
DB search
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPEGVDIELLHDATRREARSG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcttctcgtacttcaaggatttggtgggaagagaagtaactgtagagctgaag
aacgatttggccatcagagggacattgcattccgttgatcagtacctcaacatcaagctc
gaaaacactcgcgtcgttgatcaagacaagtacccccacatgctttcagtaagaaactgc
ttcatcagaggttcggtagtgagatacgtgcaattacctccagaaggggtggacattgaa
ttgttgcacgatgccactaggagagaggctaggagcggttag
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