KEGG   Vigna radiata (mung bean): 106757334
Entry
106757334         CDS       T04126                                 
Name
(RefSeq) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
vra  Vigna radiata (mung bean)
Pathway
vra03018  RNA degradation
vra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:vra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106757334
  09123 Folding, sorting and degradation
   03018 RNA degradation
    106757334
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vra03019]
    106757334
   03041 Spliceosome [BR:vra03041]
    106757334
Messenger RNA biogenesis [BR:vra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     106757334
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     106757334
Spliceosome [BR:vra03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    106757334
 Complex C
  U2 snRNP components
    106757334
SSDB
Motif
Pfam: LSM SM-ATX DUF150_C DUF1256
Other DBs
NCBI-GeneID: 106757334
NCBI-ProteinID: XP_014495462
UniProt: A0A1S3TP13
LinkDB
Position
3:867651..869823
AA seq 93 aa
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPEGVDIELLHDATRREARSG
NT seq 282 nt   +upstreamnt  +downstreamnt
atgttgttcttctcgtacttcaaggatttggtgggaagagaagtaactgtagagctgaag
aacgatttggccatcagagggacattgcattccgttgatcagtacctcaacatcaagctc
gaaaacactcgcgtcgttgatcaagacaagtacccccacatgctttcagtaagaaactgc
ttcatcagaggttcggtagtgagatacgtgcaattacctccagaaggggtggacattgaa
ttgttgcacgatgccactaggagagaggctaggagcggttag

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