Vigna radiata (mung bean): 106757591
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Entry
106757591 CDS
T04126
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
vra
Vigna radiata (mung bean)
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
vra03041
]
106757591
Spliceosome [BR:
vra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
106757591
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_19
TPR_12
NRDE-2
UTP6_C
TPR_MalT
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
106757591
NCBI-ProteinID:
XP_014495770
UniProt:
A0A1S3TPQ2
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Position
3:3548334..3558910
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AA seq
826 aa
AA seq
DB search
MADSESVATEASAHSAADAYASAGYAESGSNPAIEAGATTDQPAGEGGQSTSTYGFGYSN
TGDVNAYTGDPNSVLQQSQFNATGDTKPAGGVPDANEASAGVGSTAAEPALTSNYSSSVN
GSVTNAAGLENGNALENVDGSADEKQLADGYGAALSAEEDRLWNIVRANSLDFSAWTSLI
EETEKVAEDNILKIRRVYDSFLAEFPLCYGYWKKYADHEARLGTIDKVVEVYERAVQGVT
YSVDIWLHYCIFAISTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQDWARL
AIIYTRILENPNQQLDRYFSSFKELAGNRPLSELRTAEEAAVSVASEATGQGSEGEVHPD
GAEKSPKSVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIFGFETAIRRPYFHVRPLNVG
ELENWHNYLDFLEREGDLSKIVKLYERCVIACANYPEYWIRYVLCMEASGNMDLANNVLA
RATQVFVKRQPEIHLFCARFKEQNGDIEGARAAYQLVHTETSPGLLEAIIRHANMEHRLG
KMEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNAEKARQILIEGLENVLLS
KPLLEALLHFEAIQPFPKRVDINFLESWVCKFIMPNSESPSVASAIEREELSSIFLEFLN
LFGDVQSIKRAEDXHAKLFLPHRSMSELKKRHAEDFLSSDKVKASRTYSAQSPAQSVIGA
YPNAQNQWTNYGVQPQTWPPVTQAQGQQWTAGYTQQASYGAYAGYGGNYANSQLPATVPP
STAYGTYPPSYPAAQPAVPQQPYVQPVAAPAQQPAAVPQAYYGSYY
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggctgatagtgaatccgttgctaccgaagcatccgctcattccgctgctgatgcatat
gcttcggctggttatgccgagtctggttcaaatcctgctatcgaggcaggtgctactact
gatcaaccggctggagaaggaggtcagtccacttcaacgtatggatttggttattctaat
actggtgatgtgaatgcgtatactggggatccgaattctgttctacaacaatcccaattc
aatgcaactggtgataccaagccagctggtggagtgccggatgcgaacgaggcctctgct
ggggttggaagcactgctgctgagcctgctctgacttctaactacagttcatctgtcaat
ggctcagtgacgaacgctgccggacttgaaaacggaaatgcattggaaaacgttgacggg
tcagctgatgaaaaacaactcgcagatggctacggagctgccttgtctgctgaggaagat
cgactgtggaatattgtaagagctaattctttagatttcagtgcctggacttccttgatt
gaagagacagagaaggtagccgaggacaatattctgaagattcgaagagtttatgattcc
tttctggcagaatttcccttgtgctatggttattggaagaaatatgctgaccatgaggca
cgacttggcactattgataaagttgttgaggtgtatgagcgtgctgttcaaggggttaca
tattcagtggacatttggttgcattattgcatatttgctataagcacatatggggatccc
gacactgttcgtaggcttttcgaacgaggattggcttatgttggaacagattatctttct
tttcccctctgggataaatacattgaatatgagtacatgcagcaggactgggctcgcctt
gccataatttacaccagaatattagagaatccaaatcaacaattagatcggtatttcagc
agcttcaaagagttagctggaaaccgacctttgtcagagttacgaactgctgaagaagct
gctgtaagtgttgcttcagaggctaccggacaaggttctgagggagaggttcatcctgat
ggtgcagagaagtctcctaaatctgtaagtgctggcttaacagaagcagaagagttggag
aagtatatcgccataagagaagagatctataaaaaagctaaagagttcgattctaagatc
tttggttttgaaacagccatccgaaggccctattttcacgtccggcctctcaatgttgga
gagcttgaaaattggcacaactatctggactttttagaaagggaaggtgacttaagcaag
attgtcaagttgtatgagaggtgtgtcattgcatgtgccaattatcctgagtattggata
cgctatgttttgtgtatggaagccagtggaaacatggatcttgcaaataatgttcttgcc
cgagccacccaagtctttgttaagagacaaccggagatacatcttttctgtgcacggttt
aaggagcagaatggagatatagagggtgctagagctgcctatcaacttgtgcataccgaa
acttcccctggtcttcttgaagcaataatcaggcatgccaatatggaacaccgattggga
aaaatggaggatgccttctctttgtacgaacaggccattgctattgagaaaggaaaagaa
cattcacaaacattgccgatgttgtttgctcagtattctcgatttgtttatttggcttcc
gggaatgcagagaaggcaagacagattttaattgaggggctggagaatgttttgttgtca
aaaccacttctcgaggccttattgcattttgaggctattcaaccctttccaaagcgagtt
gatatcaactttctggagtcatgggtatgcaaatttataatgcctaactcagagagtcct
agtgtagctagtgcaattgagcgtgaggagctttctagtatttttctggagtttttgaat
ctctttggagatgttcaatcaatcaagagagcagaggatangcatgccaaattgtttttg
ccacacagaagcatgtcggagttgaagaaacgtcatgccgaggatttcttatcttcagac
aaagttaaagcatcaagaacttattctgctcaatcacccgcccaatccgtgattggtgcg
tatccaaatgcacaaaaccaatggactaattatggagtacaacctcaaacttggcctcct
gttacacaagcacaggggcaacagtggactgctggctacacccagcaggcttcttacggg
gcttatgctggatatggcggcaattatgcaaattctcaattgcctgcaacagttccaccg
agtacagcatacgggacctatcctccttcttatcctgctgcacagccggcggttcctcaa
cagccctatgtgcaacctgttgcagctcctgcacagcaacctgctgcagttcctcaagcc
tattacggtagttattattga
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