Vigna radiata (mung bean): 106757619
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Entry
106757619 CDS
T04126
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106757619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vra03021
]
106757619
03041 Spliceosome [BR:
vra03041
]
106757619
03036 Chromosome and associated proteins [BR:
vra03036
]
106757619
Transcription machinery [BR:
vra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
106757619
Spliceosome [BR:
vra03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
106757619
Complex B
106757619
Complex C
U2 SnRNP specific factors
106757619
Chromosome and associated proteins [BR:
vra03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
106757619
TFTC complex
106757619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
106757619
NCBI-ProteinID:
XP_014495818
UniProt:
A0A1S3TPW7
LinkDB
All DBs
Position
3:6993711..7006467
Genome browser
AA seq
1366 aa
AA seq
DB search
MAVSEEECSSAKSGPSSSSSASRYYLSKCVLRGSVVLQVLYAHIRSPSSDDIIFGKETSI
ELVVIEDDGNVQSVCDQPVFGTIKDLAILPWNEKFRARDPQLWGKDLLVATSDSGKLSLL
TFCNEMHRFVSVTHIQMSIPGNPLDLPGRRLAVDSSGCFIASSAYEDRLVMFSMSMSSGD
IIDERILYPSESEGTASSSRSTQRTSMRGTIWSICFISQDSRQPSKEYNPVLAVIINRRG
SLQNELLLLEWNVKAHKIFVISQYAEAGPLAYDIAEVPNSGGLAFLFRTGDVLLMDLRDP
RNPFCVYKTNLNILPNAMEEQTYVDDSCKLHDVDDERFNVAACALLELSDYDPMCIDSDN
GGANSGYKYICSWSWAPENNRDPRMIFCVDTGEFFMIEVLFDSEGPKVNLSECLYKGLPC
KALLWVEGGYVAALVEMGDGVVLKLEDGRLCYTNPIQNIAPILDMAVVDYRDEKHDQMFA
CCGVAPEGSLRIIRNGINVENLHRTASIYQGVTGTWTVRMKITDSHHSFLVLSFVEETRI
LSVGLSFTDVTDSVGFEPDVCTLACGLVTDGVLVQIHRCTVKLCLPTKAAHSEGIPLPSP
ISTSWSPDNVSISLGAVGHNFIVVSTSNPCFLFILGVRLLSAYQYEIYEMQHLVLQNELS
CISIPGQEIERKPSNSSISANNSNISSFQSGVDISKTFVIGTHRPSVEIWFFAPGGGITV
VACGTISLTNTIGTAISGCVPQDVRLVFVDKYYVLAGLRNGMLLRFEWPVEPCPSSPINM
VDTALSSINLVNSASNVLGKRNDPPSTLQLIAIRRIGITPVFLVPLGDTLDADIIALSDR
PWLLHSARHSLSYTSISFQPSTHVTPVCSVECPKGILFVAENCLHLVEMVHSKRLNMQKF
HLEGTPRKVLYHDESKMLLVMRTELNCGTCLSDICCVDPLSGSVVSTFRLEHGETGKSME
LIRVGSEQVLVVGTSLSSGPAIMPSGEAESCKGRLLVLCLVHVQNSDSGSMTFCSKGGSS
SQKTSPFHEIVSYAPEQLSSSSLGSSPDDNSSDGIKLDENEVWQFRLAYATKWQGVVFKI
CPYLDRYFLASAGNAFYVCGFPNDNPQRVRRYAMGRTHHMITSLSAHFTRIAVGDCRDGI
ILFSYHEEARKLEQLCCDPSRRLVADCILMDADTAVVSDRKGGIAILCSNHLEDNASTEC
NMTLSCAYFMAEIALSVQKGSYSYRLPADDVLQGGNGPKTNVDSLQNTIIASTLLGSIMI
FIPLSREEYELLEAVQERLVVHQLTAPVLGNDHNEFRRREIRGGVPKILDGDVLTQFLEL
TSMQQKMILSSEPPDIAKPSLKPLLPPNVSVNQVVQLLERVHYALN
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttccgaagaggaatgctcttcagcgaagtctggtccttcttcttcttcctcc
gcctcgcgctactacctctccaaatgcgtcctcagaggaagcgtcgttcttcaggtcctc
tacgctcacattcgttctccctcctcagatgacatcattttcggcaaggaaacttctatt
gaattggtggttattgaggatgatgggaatgtgcaatctgtgtgtgatcagcccgtcttt
ggcaccatcaaagatcttgccatattgccttggaacgagaagtttcgtgcacgtgatcct
cagctgtggggtaaagaccttttggttgccacatccgattctgggaagctgtcgttgctc
acgttttgcaatgaaatgcacaggtttgtttctgtaacacatatacagatgtctattcct
ggaaacccattggatcttcctggaagaaggttagccgttgattccagtggttgttttatt
gcttctagtgcatacgaagatcggctggttatgttttctatgtcgatgtccagtggtgat
atcattgatgagagaattctatatccttcggaaagtgaaggaactgcaagttcttccaga
agcacccaaagaaccagtatgcgtggtaccatttggagcatctgcttcatttcacaagat
tccagacaaccaagcaaagagtataatcctgtacttgcagttattataaataggagggga
tcccttcaaaatgaattgctattattggaatggaatgttaaagcacacaaaatatttgtt
atttctcagtatgctgaagctgggcctctggcatatgacattgctgaagttcctaactct
gggggacttgcattcctgttcaggactggtgatgttctcttaatggatcttagagatccc
cgcaatccattctgtgtctataagactaacttgaacattttgccaaatgccatggaagag
cagacttatgtggatgactcttgtaaattacacgatgttgacgatgaacggtttaatgtt
gctgcctgtgctttgttggaactgagcgattatgatcctatgtgcatagacagtgacaat
ggtggtgctaattcaggctacaaatacatatgctcatggagttgggcacctgaaaataat
agagatcctaggatgatcttctgtgtagatactggggaattttttatgattgaagttctt
tttgattctgaaggccctaaggttaatctgtctgagtgtctctataaaggtctgccgtgt
aaagcacttttatgggttgaaggtggatatgtagctgcccttgtggaaatgggggatggt
gtggtcctgaaattggaagatggaaggctatgctatacaaaccctattcaaaacattgca
ccaatcttggatatggcagttgtagattatcgtgatgagaagcatgatcaaatgtttgct
tgctgtggtgtggctccagaggggtcattaaggataattcgaaatggtattaatgtggaa
aatctacacaggactgcttctatatatcaaggggtaactggtacttggactgtcagaatg
aaaattactgattcacatcattcttttctagttctatcgtttgttgaggaaaccagaata
ttgtcagttgggttaagttttactgatgtgactgattcagttggtttcgaacctgatgtc
tgtactctggcatgtggccttgtgactgatggtgtacttgttcagatccaccgctgtact
gttaagctttgtttgcccactaaagctgctcattccgaaggtatccctttgccctctcct
atttccacatcttggtctccagacaatgtgagtatcagtttgggggcagttgggcataat
ttcatagttgtgtcgacctctaacccatgctttttgtttatccttggggttagattgcta
tcagcttatcaatatgaaatttatgaaatgcaacatttggtactgcagaatgaattatca
tgcatttccatccctggacaagaaattgagcgaaaaccatccaattcatccatttcagca
aataatagtaacatctcttctttccaaagtggagtggacatcagtaaaacctttgttatt
ggtacacacaggccgtctgtggaaatttggttttttgcaccaggtggaggaattacagta
gtggcttgtgggacaatttcattgactaatacaatagggactgccatcagtggttgtgta
cctcaagatgtacgacttgtatttgttgataagtattatgttcttgctggattgaggaat
ggaatgctcctccgctttgagtggccggtggaaccatgtccatcatcaccaataaatatg
gtggatactgctttatcttctataaatttggtaaattctgcaagtaatgttttaggcaag
agaaacgaccctccttcaacacttcaattgattgccattcgacgcattggcattactcca
gttttcttggtgccactaggtgacacactggatgctgatataattgctcttagtgatagg
ccttggttgttgcatagtgcaagacacagcctttcatatacttctatctcatttcaacct
tccacacatgtgactcctgtttgctctgttgagtgtccaaaaggaatattgtttgttgca
gaaaactgtttacatctggtggagatggttcacagcaagagacttaatatgcagaagttt
catttagagggcactcctaggaaggtcctgtatcacgatgaaagcaaaatgttgctagtg
atgaggactgaactgaattgtggtacatgtctgtctgacatatgttgtgtggatccccta
agtggatcagtagtgtcgacttttagacttgaacatggtgaaacaggaaaatccatggaa
ttaataagagttggaagtgagcaagtgcttgttgttggaactagtttgtcttctggtcca
gccataatgcccagtggtgaagctgaaagttgcaagggtcgtcttcttgttctttgtctt
gttcatgtgcaaaattcagatagtggttcaatgacattctgttcaaagggagggtcatca
tctcaaaaaacttcgccattccatgaaattgtttcatatgctcctgaacagttatcgagc
agcagccttggcagcagtcctgatgataatagttctgatggcatcaaacttgatgaaaat
gaagtatggcaattccgattggcttatgcaacaaaatggcaaggggtggtttttaaaatc
tgtccttatcttgatcgttacttcttggcatctgctggaaatgctttctatgtttgtggt
ttccctaatgacaatcctcaaagagtgagaaggtatgctatgggaaggacgcaccacatg
ataacatctttgagtgcacattttacaagaattgcagttggtgattgtcgtgatggaatc
atattattttcttatcatgaggaagctagaaaattggagcaactttgctgtgatccatca
cgaaggttagttgctgattgcattttgatggatgctgatacagctgttgtttcggatcga
aaaggaggcattgctattttatgttcaaatcatttggaagataatgcgagtactgaatgc
aacatgacactaagctgtgcttatttcatggctgagattgccttgagcgtacagaagggc
tcatattcatacagacttccagctgatgatgttttgcaaggcggcaatggccccaagaca
aatgttgattcacttcaaaatactattattgccagtaccctgttaggaagcataatgatc
ttcatccctttatcaagggaagaatatgagttattagaagctgtgcaagaaagacttgtt
gtccaccagttgaccgcacctgttctaggaaatgatcataacgagtttcgccgtcgtgaa
attcggggtggagtacccaagatacttgatggtgacgtgttaacccagtttctagagctg
acaagtatgcagcaaaagatgattttgtcttccgagccacctgatatagcaaaaccaagt
ttgaagccactcctaccccccaatgtttctgtaaatcaggtggttcaacttcttgaacga
gtccattatgctctgaactaa
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