Vigna radiata (mung bean): 106757673
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Entry
106757673 CDS
T04126
Name
(RefSeq) THO complex subunit 4D isoform X2
KO
K12881
THO complex subunit 4
Organism
vra
Vigna radiata (mung bean)
Pathway
vra03013
Nucleocytoplasmic transport
vra03015
mRNA surveillance pathway
vra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
vra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106757673
09122 Translation
03013 Nucleocytoplasmic transport
106757673
03015 mRNA surveillance pathway
106757673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vra03019
]
106757673
03041 Spliceosome [BR:
vra03041
]
106757673
Messenger RNA biogenesis [BR:
vra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
106757673
TREX complex
106757673
Spliceosome [BR:
vra03041
]
Complex C
Other components
EJC/TREX
106757673
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
106757673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
106757673
NCBI-ProteinID:
XP_014495897
UniProt:
A0A1S3TQ89
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All DBs
Position
3:complement(9419464..9424905)
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AA seq
296 aa
AA seq
DB search
MASSLDMSLDDRIKNRSNRGGRGRGGRGRAQSGRGPSGSLNGGRMAGAVNGRRMTGAGNG
GRTSGAVRRGPLMVNTRPSSYAIAKSIRRTRPFPWQHDLFEDSLRAAGIQGVEVGTKLYV
SNLDHGVTNEDIRELFSELGELKRYAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVL
LDGKPMKIEIVGSNAELPVSARVNVTGVNGRRKRTVVMTPRGGPAGGRAIPNRGAGWGRR
GGTRSGNGRGRGGGGRGRGNGRGGGRGRGRKDAVEKSAEELDKELDTYHAEAMNIS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttccttggatatgtcacttgatgatagaataaagaacagaagtaacagagga
ggtagaggtagaggaggacgtggcagagcccagtctggccgtgggccaagcgggtctctt
aatggtggaagaatggccggtgctgttaatggtagaagaatgactggtgccggtaatggt
ggaagaacatctggtgctgttcgtagaggtcctcttatggttaacactcggccatcatca
tatgctattgccaagtctattcgcagaactaggccctttccatggcagcatgatttgttt
gaagatagcttaagagctgcagggattcaaggagtagaagttggcaccaagttatatgtt
tccaacttggatcatggagtaaccaatgaagacataagggaacttttctctgagcttgga
gagttgaagcgttatgctgttcattatgacaaaaatggacatccaagtggttcggctgaa
gttgtttatactagaagaagtgatgcatttgctgctcttaaacgatataataatgtgctt
ttggatggaaagcccatgaagattgagattgttggttccaacgcagaattgcccgttagt
gctcgggtgaatgtcactggggtgaatggacgtaggaagaggactgttgtaatgacgcct
agaggtggaccagctggaggtcgtgctattcctaatcgtggtgctggttggggacgtcgt
ggtggcacaaggagtggcaatggtcggggtagaggtggcggaggtcgtggtcgtggcaat
ggtcgaggtggaggtcgaggccgtggtagaaaagacgccgttgagaaatcagcagaagaa
cttgacaaagaactggatacctatcacgctgaggccatgaacatctcttga
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